RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 RIBC2Q9H4K1 309 aa14.39□□□□□ -0.11
HMGCS1-206ENST00000511774 OR2S2Q9NQN1 319 aa14.39□□□□□ -0.11
HMGCS1-206ENST00000511774 FAM53CQ9NYF3 392 aa14.39□□□□□ -0.11
HMGCS1-206ENST00000511774 RCC2Q9P258 522 aaKnown RBP14.39□□□□□ -0.11
HMGCS1-206ENST00000511774 TRAPPC2LQ9UL33 140 aa14.39□□□□□ -0.11
HMGCS1-206ENST00000511774 DHDHQ9UQ10 334 aa14.39□□□□□ -0.11
HMGCS1-206ENST00000511774 SAA2-SAA4A0A096LPE2 208 aa14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 TRBV12-3P01733 135 aa14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 CSTBP04080 98 aaKnown RBP14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 SAA2P0DJI9 122 aaPredicted RBP14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 SOX2P48431 317 aa14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 MECP2P51608 486 aaKnown RBP14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 EWSR1Q01844 656 aaKnown RBP eCLIP14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 FLOT2Q14254 428 aa14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 MPV17LQ2QL34 196 aa14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 AKIRIN2Q53H80 203 aa14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 DEFB125Q8N687 156 aa14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 TSEN15Q8WW01 171 aaKnown RBP14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 ST6GALNAC5Q9BVH7 336 aa14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 GABARAPL1Q9H0R8 117 aa14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 METTL9Q9H1A3 318 aa14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 RANGRFQ9HD47 186 aaPredicted RBP14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 MED4Q9NPJ6 270 aa14.38□□□□□ -0.11
HMGCS1-206ENST00000511774 G3V2T6 193 aa14.37□□□□□ -0.11
HMGCS1-206ENST00000511774 CD7P09564 240 aa14.37□□□□□ -0.11
HMGCS1-206ENST00000511774 ZP3P21754 424 aa14.37□□□□□ -0.11
HMGCS1-206ENST00000511774 CALB2P22676 271 aa14.37□□□□□ -0.11
HMGCS1-206ENST00000511774 GYS2P54840 703 aa14.37□□□□□ -0.11
HMGCS1-206ENST00000511774 DYRK1AQ13627 763 aa14.37□□□□□ -0.11
HMGCS1-206ENST00000511774 GLDNQ6ZMI3 551 aaPredicted RBP14.37□□□□□ -0.11
HMGCS1-206ENST00000511774 LINC00596Q86U02 117 aa14.37□□□□□ -0.11
HMGCS1-206ENST00000511774 LHFPL3Q86UP9 236 aa14.37□□□□□ -0.11
HMGCS1-206ENST00000511774 RFKQ969G6 155 aa14.37□□□□□ -0.11
HMGCS1-206ENST00000511774 ORAI1Q96D31 301 aa14.37□□□□□ -0.11
HMGCS1-206ENST00000511774 CLCC1Q96S66 551 aa14.37□□□□□ -0.11
HMGCS1-206ENST00000511774 TAF9BQ9HBM6 251 aa14.37□□□□□ -0.11
HMGCS1-206ENST00000511774 ETAA1Q9NY74 926 aa14.37□□□□□ -0.11
HMGCS1-206ENST00000511774 DNAH6Q9C0G6 4158 aa14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 DEDDO75618 318 aa14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 ALDH3A2P51648 485 aa14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 TMEM267Q0VDI3 215 aaPredicted RBP14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 PMS2P11Q13670 270 aa14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 TMEM30BQ3MIR4 351 aa14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 C6orf183Q5T699 404 aa14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 LCN12Q6JVE5 192 aa14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 Q8N402 240 aa14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 ACBD7Q8N6N7 88 aa14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 OR5AK2Q8NH90 309 aa14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 JAM3Q9BX67 310 aa14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 GABARAPL3Q9BY60 117 aa14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 IFI27L2Q9H2X8 130 aa14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 SLA2Q9H6Q3 261 aa14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 AASSQ9UDR5 926 aa14.36□□□□□ -0.11
HMGCS1-206ENST00000511774 TMEM212A6NML5 194 aa14.35□□□□□ -0.11
HMGCS1-206ENST00000511774 ZNF785A8K8V0 405 aa14.35□□□□□ -0.11
HMGCS1-206ENST00000511774 MAGEB3O15480 346 aa14.35□□□□□ -0.11
HMGCS1-206ENST00000511774 CD81P60033 236 aa14.35□□□□□ -0.11
HMGCS1-206ENST00000511774 ATP6AP1Q15904 470 aa14.35□□□□□ -0.11
HMGCS1-206ENST00000511774 SLC22A6Q4U2R8 563 aa14.35□□□□□ -0.11
HMGCS1-206ENST00000511774 STX19Q8N4C7 294 aa14.35□□□□□ -0.11
HMGCS1-206ENST00000511774 CPNE2Q96FN4 548 aaPredicted RBP14.35□□□□□ -0.11
HMGCS1-206ENST00000511774 NEURL2Q9BR09 285 aa14.35□□□□□ -0.11
HMGCS1-206ENST00000511774 ALG8Q9BVK2 526 aa14.35□□□□□ -0.11
HMGCS1-206ENST00000511774 FADS2O95864 444 aaKnown RBP14.34□□□□□ -0.11
HMGCS1-206ENST00000511774 TFAP2AP05549 437 aa14.34□□□□□ -0.11
HMGCS1-206ENST00000511774 CT45A6P0DMU7 189 aa14.34□□□□□ -0.11
HMGCS1-206ENST00000511774 CT45A5P0DMU8 189 aa14.34□□□□□ -0.11
HMGCS1-206ENST00000511774 CT45A7P0DMV0 189 aa14.34□□□□□ -0.11
HMGCS1-206ENST00000511774 SSBP2P81877 361 aaPredicted RBP14.34□□□□□ -0.11
HMGCS1-206ENST00000511774 PLGLAQ15195 96 aa14.34□□□□□ -0.11
HMGCS1-206ENST00000511774 RPL39P5Q59GN2 51 aa14.34□□□□□ -0.11
HMGCS1-206ENST00000511774 AMIGO2Q86SJ2 522 aa14.34□□□□□ -0.11
HMGCS1-206ENST00000511774 LGALS12Q96DT0 336 aa14.34□□□□□ -0.11
HMGCS1-206ENST00000511774 MBNL3Q9NUK0 354 aaKnown RBP14.34□□□□□ -0.11
HMGCS1-206ENST00000511774 SIGLEC8Q9NYZ4 499 aa14.34□□□□□ -0.11
HMGCS1-206ENST00000511774 POMPQ9Y244 141 aa14.34□□□□□ -0.11
HMGCS1-206ENST00000511774 EXOGQ9Y2C4 368 aaKnown RBP14.34□□□□□ -0.11
HMGCS1-206ENST00000511774 ABCA13Q86UQ4 5058 aa14.33□□□□□ -0.12
HMGCS1-206ENST00000511774 RBMXL2O75526 392 aaKnown RBP14.33□□□□□ -0.12
HMGCS1-206ENST00000511774 CA2P00918 260 aa14.33□□□□□ -0.12
HMGCS1-206ENST00000511774 ZNF93P35789 620 aaPredicted RBP14.33□□□□□ -0.12
HMGCS1-206ENST00000511774 GTF2A1P52655 376 aaPredicted RBP14.33□□□□□ -0.12
HMGCS1-206ENST00000511774 DDI2Q5TDH0 399 aa14.33□□□□□ -0.12
HMGCS1-206ENST00000511774 RAB12Q6IQ22 244 aa14.33□□□□□ -0.12
HMGCS1-206ENST00000511774 POC5Q8NA72 575 aa14.33□□□□□ -0.12
HMGCS1-206ENST00000511774 OR5T1Q8NG75 326 aa14.33□□□□□ -0.12
HMGCS1-206ENST00000511774 MRPS24Q96EL2 167 aaKnown RBP14.33□□□□□ -0.12
HMGCS1-206ENST00000511774 SRD5A3Q9H8P0 318 aa14.33□□□□□ -0.12
HMGCS1-206ENST00000511774 JPT1Q9UK76 154 aa14.33□□□□□ -0.12
HMGCS1-206ENST00000511774 RNF150Q9ULK6 438 aa14.33□□□□□ -0.12
HMGCS1-206ENST00000511774 PKHD1P08F94 4074 aa14.33□□□□□ -0.12
HMGCS1-206ENST00000511774 C13orf42A0A1B0GVH6 325 aa14.32□□□□□ -0.12
HMGCS1-206ENST00000511774 MCRIP1C9JLW8 97 aa14.32□□□□□ -0.12
HMGCS1-206ENST00000511774 H0YJW9 148 aa14.32□□□□□ -0.12
HMGCS1-206ENST00000511774 SC5DO75845 299 aa14.32□□□□□ -0.12
HMGCS1-206ENST00000511774 RPSAP08865 295 aaKnown RBP14.32□□□□□ -0.12
HMGCS1-206ENST00000511774 GNGT1P63211 74 aa14.32□□□□□ -0.12
HMGCS1-206ENST00000511774 CD300EQ496F6 205 aaPredicted RBP14.32□□□□□ -0.12
HMGCS1-206ENST00000511774 SIGIRRQ6IA17 410 aa14.32□□□□□ -0.12
HMGCS1-206ENST00000511774 ZNF562Q6V9R5 426 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms