RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 TSPAN15O95858 294 aa12.81□□□□□ -0.36
PDLIM5-216ENST00000511767 TMEM11P17152 192 aa12.81□□□□□ -0.36
PDLIM5-216ENST00000511767 RAB6AP20340 208 aa12.81□□□□□ -0.36
PDLIM5-216ENST00000511767 CENPVQ7Z7K6 275 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-216ENST00000511767 TGIF2LXQ8IUE1 241 aa12.81□□□□□ -0.36
PDLIM5-216ENST00000511767 LYG1Q8N1E2 194 aa12.81□□□□□ -0.36
PDLIM5-216ENST00000511767 C5orf56Q8N8D9 126 aa12.81□□□□□ -0.36
PDLIM5-216ENST00000511767 OR5AU1Q8NGC0 362 aa12.81□□□□□ -0.36
PDLIM5-216ENST00000511767 OR2T10Q8NGZ9 312 aa12.81□□□□□ -0.36
PDLIM5-216ENST00000511767 PTX4Q96A99 478 aa12.81□□□□□ -0.36
PDLIM5-216ENST00000511767 RBMXL1Q96E39 390 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-216ENST00000511767 CHMP1AQ9HD42 196 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-216ENST00000511767 ABRACLQ9P1F3 81 aa12.81□□□□□ -0.36
PDLIM5-216ENST00000511767 MOB4Q9Y3A3 225 aa12.81□□□□□ -0.36
PDLIM5-216ENST00000511767 NOTOA8MTQ0 251 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 ADARB2-AS1A8MUL3 147 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 FGF16O43320 207 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 PEX14O75381 377 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 RGS11O94810 467 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 CSF1P09603 554 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 SCTP09683 121 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 CD83Q01151 205 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 NEDD8Q15843 81 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 IZUMO1Q8IYV9 350 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 OR10R2Q8NGX6 335 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 SETD6Q8TBK2 473 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 IL1F10Q8WWZ1 152 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 RAB3CQ96E17 227 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 CMSS1Q9BQ75 279 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 NOTCH1P46531 2555 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 NOTCH3Q9UM47 2321 aa12.8□□□□□ -0.36
PDLIM5-216ENST00000511767 SMIM30A4D0T7 59 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 LINC01548A6NM66 108 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 ITGB1BP1O14713 200 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 FBXO24O75426 580 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 CD36P16671 472 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 SDC2P34741 201 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 CEACAM6P40199 344 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 OR3A3P47888 321 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 C2orf68Q2NKX9 166 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 ARSJQ5FYB0 599 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 TCTEX1D4Q5JR98 221 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 C9orf152Q5JTZ5 239 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 MOB1BQ7L9L4 216 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 FAM110DQ8TAY7 271 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 KCTD7Q96MP8 289 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 CITED2Q99967 270 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 ZNF251Q9BRH9 671 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 CHCHD6Q9BRQ6 235 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 AGMATQ9BSE5 352 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 ABHD14AQ9BUJ0 271 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 RNF167Q9H6Y7 350 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 MGAT4AQ9UM21 535 aa12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 TET2Q6N021 2002 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-216ENST00000511767 IGKV1-6A0A0C4DH72 117 aa12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 METTL21EPA6NDL7 271 aa12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 TRDCB7Z8K6 153 aa12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 TXNL1O43396 289 aa12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 MOSP00540 346 aa12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 CLEC2LP0C7M8 214 aa12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 GNB3P16520 340 aa12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 GADD45AP24522 165 aa12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 F2RL1P55085 397 aa12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 ZNF833PQ6ZTB9 187 aa12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 Q8N9W7 124 aa12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 RITA1Q96K30 269 aa12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 NABP2Q9BQ15 211 aa12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 PARP12Q9H0J9 701 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 C11orf54Q9H0W9 315 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 C12orf4Q9NQ89 552 aa12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 SLC23A1Q9UHI7 598 aa12.78□□□□□ -0.36
PDLIM5-216ENST00000511767 NCBP2LA6PVI3 153 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-216ENST00000511767 MFNGO00587 321 aa12.77□□□□□ -0.37
PDLIM5-216ENST00000511767 PROP1O75360 226 aa12.77□□□□□ -0.37
PDLIM5-216ENST00000511767 IGHG2P01859 326 aa12.77□□□□□ -0.37
PDLIM5-216ENST00000511767 CD3GP09693 182 aa12.77□□□□□ -0.37
PDLIM5-216ENST00000511767 ZBTB25P24278 435 aa12.77□□□□□ -0.37
PDLIM5-216ENST00000511767 C10orf99Q6UWK7 81 aa12.77□□□□□ -0.37
PDLIM5-216ENST00000511767 NDUFA11Q86Y39 141 aa12.77□□□□□ -0.37
PDLIM5-216ENST00000511767 TSPAN14Q8NG11 270 aa12.77□□□□□ -0.37
PDLIM5-216ENST00000511767 OR2AK2Q8NG84 335 aa12.77□□□□□ -0.37
PDLIM5-216ENST00000511767 S1PR3Q99500 378 aa12.77□□□□□ -0.37
PDLIM5-216ENST00000511767 CENPOQ9BU64 300 aa12.77□□□□□ -0.37
PDLIM5-216ENST00000511767 TOLLIPQ9H0E2 274 aa12.77□□□□□ -0.37
PDLIM5-216ENST00000511767 IFI27L2Q9H2X8 130 aa12.77□□□□□ -0.37
PDLIM5-216ENST00000511767 GHITMQ9H3K2 345 aa12.77□□□□□ -0.37
PDLIM5-216ENST00000511767 A0A087WXM4 84 aa12.76□□□□□ -0.37
PDLIM5-216ENST00000511767 ST8SIA5O15466 376 aa12.76□□□□□ -0.37
PDLIM5-216ENST00000511767 HIST1H1DP16402 221 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-216ENST00000511767 HLA-DRB3P79483 266 aa12.76□□□□□ -0.37
PDLIM5-216ENST00000511767 LSAMPQ13449 338 aa12.76□□□□□ -0.37
PDLIM5-216ENST00000511767 NSUN5P1Q3KNT7 163 aa12.76□□□□□ -0.37
PDLIM5-216ENST00000511767 CDNFQ49AH0 187 aa12.76□□□□□ -0.37
PDLIM5-216ENST00000511767 OR8H1Q8NGG4 311 aa12.76□□□□□ -0.37
PDLIM5-216ENST00000511767 ATG5Q9H1Y0 275 aa12.76□□□□□ -0.37
PDLIM5-216ENST00000511767 ABCG5Q9H222 651 aa12.76□□□□□ -0.37
PDLIM5-216ENST00000511767 PIPOXQ9P0Z9 390 aa12.76□□□□□ -0.37
PDLIM5-216ENST00000511767 OR1A1Q9P1Q5 309 aa12.76□□□□□ -0.37
PDLIM5-216ENST00000511767 DAPK2Q9UIK4 370 aa12.76□□□□□ -0.37
PDLIM5-216ENST00000511767 SAA2-SAA4A0A096LPE2 208 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms