RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 IL17BQ9UHF5 180 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 CROCCQ5TZA2 2017 aa5.05□□□□□ -1.6
USP38-203ENST00000511739 C11orf94C9JXX5 98 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 C5orf67F2Z3F1 127 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 DXOO77932 396 aaKnown RBP5.04□□□□□ -1.6
USP38-203ENST00000511739 MPZL1O95297 269 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 HOXB3P14651 431 aaPredicted RBP5.04□□□□□ -1.6
USP38-203ENST00000511739 MFAP4P55083 255 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 POLR2GP62487 172 aaKnown RBP eCLIP5.04□□□□□ -1.6
USP38-203ENST00000511739 ZNF56Q15929 161 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 MPV17LQ2QL34 196 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 FAM74A4Q5TZK3 123 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 ZNF770Q6IQ21 691 aaPredicted RBP5.04□□□□□ -1.6
USP38-203ENST00000511739 MRPL54Q6P161 138 aaKnown RBP5.04□□□□□ -1.6
USP38-203ENST00000511739 ZBTB34Q8NCN2 500 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 TP53RKQ96S44 253 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 VGLL1Q99990 258 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 PAXXQ9BUH6 204 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 FAM60AQ9NP50 221 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 ZDHHC8Q9ULC8 765 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 IFITM10A6NMD0 228 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 SNURFLB1AK76 121 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 PYCARD-AS1I3L0S3 204 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 TGFAP01135 160 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 ISG15P05161 165 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 CTLA4P16410 223 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 RPL29P47914 159 aaKnown RBP5.04□□□□□ -1.6
USP38-203ENST00000511739 HLA-DRB3P79483 266 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 HLA-DRB5Q30154 266 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 OR4C13Q8NGP0 309 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 GALNT14Q96FL9 552 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 MARS2Q96GW9 593 aaKnown RBP5.04□□□□□ -1.6
USP38-203ENST00000511739 NAT8Q9UHE5 227 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 DNAL4O96015 105 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 DYNLT3P51808 116 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 FAM27D1Q5T7N8 215 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 LDLRAD3Q86YD5 345 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 SMIM4Q8WVI0 70 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 ITLN1Q8WWA0 313 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 MRPS18BQ9Y676 258 aaKnown RBP5.04□□□□□ -1.6
USP38-203ENST00000511739 TRPM7Q96QT4 1865 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 ZNF638Q14966 1978 aaKnown RBP5.04□□□□□ -1.6
USP38-203ENST00000511739 A0A1B0GTL3 188 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 LIPT2A6NK58 231 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 MGST3O14880 152 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 GEMIN2O14893 280 aaKnown RBP5.04□□□□□ -1.6
USP38-203ENST00000511739 HPXP02790 462 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 SFTA3P0C7M3 94 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 SP9P0CG40 484 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 LIFP15018 202 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 TMEM33P57088 247 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 RELQ04864 619 aaPredicted RBP5.04□□□□□ -1.6
USP38-203ENST00000511739 C1QL3Q5VWW1 255 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 CBLN3Q6UW01 205 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 MMD2Q8IY49 270 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 OR8G5Q8NG78 346 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 EEF1AKMT3Q96AZ1 226 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 MEGF10Q96KG7 1140 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 GPA33Q99795 319 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 SOSTQ9BQB4 213 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 PGPEP1Q9NXJ5 209 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 SBF1O95248 1867 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 ASPDHA6ND91 283 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 SRSF10O75494 262 aaKnown RBP5.04□□□□□ -1.6
USP38-203ENST00000511739 PRSS23O95084 383 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 PTHLHP12272 177 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 RAB32Q13637 225 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 PMS2P11Q13670 270 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 HCP5Q6MZN7 132 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 ZNF383Q8NA42 475 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 SP7Q8TDD2 431 aaPredicted RBP5.04□□□□□ -1.6
USP38-203ENST00000511739 C10orf35Q96D05 121 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 UCN2Q96RP3 112 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 TMEM38BQ9NVV0 291 aa5.04□□□□□ -1.6
USP38-203ENST00000511739 TRAV39A0A0B4J263 110 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 CEACAM18A8MTB9 384 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 NPPCP23582 126 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 HMGCLL1Q8TB92 370 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 METRNQ9UJH8 293 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 A6NDN8 102 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 PNLIPP16233 465 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 LGALS3P17931 250 aaKnown RBP5.03□□□□□ -1.6
USP38-203ENST00000511739 UCP2P55851 309 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 ERVS71-1P61550 626 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 CX3CL1P78423 397 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 OVCH2Q7RTZ1 564 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 GAPTQ8N292 157 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 FAM168AQ92567 244 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 Q9N2K0 584 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 CCL28Q9NRJ3 127 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 LRRC37A2A6NM11 1700 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 A0A1W2PQD3 144 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 RBFOX2O43251 390 aaKnown RBP eCLIP5.03□□□□□ -1.6
USP38-203ENST00000511739 LIPFP07098 398 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 FCGR2BP31994 310 aaPredicted RBP5.03□□□□□ -1.6
USP38-203ENST00000511739 PCOLCEQ15113 449 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 C2orf83Q53S99 150 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 FAM209AQ5JX71 171 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 PET117Q6UWS5 81 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 FAM159AQ6UWV7 190 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms