RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 TM2D1Q9BX74 207 aa11.99□□□□□ -0.49
COL1A1-213ENST00000511732 MRPL20Q9BYC9 149 aaKnown RBP11.99□□□□□ -0.49
COL1A1-213ENST00000511732 TMEM14DPA8MWL7 114 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 CCL24O00175 119 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 SLC22A1O15245 554 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 UBBP0CG47 229 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 SLC2A2P11168 524 aaPredicted RBP11.98□□□□□ -0.49
COL1A1-213ENST00000511732 MYF6P23409 242 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 OR3A3P47888 321 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 AQP4P55087 323 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 FOXE3Q13461 319 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 HSD17B12Q53GQ0 312 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 DEFB121Q5J5C9 76 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 TMEM91Q6ZNR0 172 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 ZNF833PQ6ZTB9 187 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 NEDD4LQ96PU5 975 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 GFI1Q99684 422 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 TMEM59Q9BXS4 323 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 GON7Q9BXV9 100 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 VCXQ9H320 206 aa11.98□□□□□ -0.49
COL1A1-213ENST00000511732 SAA2-SAA4A0A096LPE2 208 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 RRP9O43818 475 aaKnown RBP11.97□□□□□ -0.49
COL1A1-213ENST00000511732 NAPSAO96009 420 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 IGHG4P01861 327 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 IGF1P05019 195 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 ELANEP08246 267 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 UCHL1P09936 223 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 SAA2P0DJI9 122 aaPredicted RBP11.97□□□□□ -0.49
COL1A1-213ENST00000511732 CDX1P47902 265 aaPredicted RBP11.97□□□□□ -0.49
COL1A1-213ENST00000511732 ACTBP60709 375 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 MMDQ15546 238 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 CXorf66Q5JRM2 361 aaPredicted RBP11.97□□□□□ -0.49
COL1A1-213ENST00000511732 LY6G6FQ5SQ64 297 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 LIPKQ5VXJ0 399 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 ZNF880Q6PDB4 577 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 SVOPQ8N4V2 548 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 KCNG3Q8TAE7 436 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 TMEM203Q969S6 136 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 GALMQ96C23 342 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 KCTD7Q96MP8 289 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 ZNF251Q9BRH9 671 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 MCRIP2Q9BUT9 160 aaKnown RBP11.97□□□□□ -0.49
COL1A1-213ENST00000511732 LPAR5Q9H1C0 372 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 IFI27L2Q9H2X8 130 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 SCN3BQ9NY72 215 aa11.97□□□□□ -0.49
COL1A1-213ENST00000511732 ZNF107Q9UII5 783 aaPredicted RBP11.97□□□□□ -0.49
COL1A1-213ENST00000511732 VDAC1P21796 283 aa11.96□□□□□ -0.49
COL1A1-213ENST00000511732 PSMB8P28062 276 aa11.96□□□□□ -0.49
COL1A1-213ENST00000511732 PPIFP30405 207 aaKnown RBP11.96□□□□□ -0.49
COL1A1-213ENST00000511732 KIR2DS1Q14954 304 aa11.96□□□□□ -0.49
COL1A1-213ENST00000511732 C11orf87Q6NUJ2 197 aa11.96□□□□□ -0.49
COL1A1-213ENST00000511732 IL1F10Q8WWZ1 152 aa11.96□□□□□ -0.49
COL1A1-213ENST00000511732 GPR61Q9BZJ8 451 aa11.96□□□□□ -0.49
COL1A1-213ENST00000511732 PARP12Q9H0J9 701 aaKnown RBP11.96□□□□□ -0.49
COL1A1-213ENST00000511732 DUSP21Q9H596 190 aa11.96□□□□□ -0.49
COL1A1-213ENST00000511732 ZNF580Q9UK33 172 aa11.96□□□□□ -0.49
COL1A1-213ENST00000511732 G3V318 75 aa11.95□□□□□ -0.5
COL1A1-213ENST00000511732 ST8SIA5O15466 376 aa11.95□□□□□ -0.5
COL1A1-213ENST00000511732 SOCS1O15524 211 aa11.95□□□□□ -0.5
COL1A1-213ENST00000511732 BPNT1O95861 308 aa11.95□□□□□ -0.5
COL1A1-213ENST00000511732 BLVRBP30043 206 aaPredicted RBP11.95□□□□□ -0.5
COL1A1-213ENST00000511732 RAB25P57735 213 aa11.95□□□□□ -0.5
COL1A1-213ENST00000511732 RPS25P62851 125 aaKnown RBP11.95□□□□□ -0.5
COL1A1-213ENST00000511732 KIAA0141Q14154 515 aaPredicted RBP11.95□□□□□ -0.5
COL1A1-213ENST00000511732 OR2AK2Q8NG84 335 aa11.95□□□□□ -0.5
COL1A1-213ENST00000511732 OR6M1Q8NGM8 313 aa11.95□□□□□ -0.5
COL1A1-213ENST00000511732 MYOZ3Q8TDC0 251 aa11.95□□□□□ -0.5
COL1A1-213ENST00000511732 DPF1Q92782 380 aa11.95□□□□□ -0.5
COL1A1-213ENST00000511732 UFD1Q92890 307 aa11.95□□□□□ -0.5
COL1A1-213ENST00000511732 HDHD3Q9BSH5 251 aaPredicted RBP11.95□□□□□ -0.5
COL1A1-213ENST00000511732 ANKRD60Q9BZ19 345 aa11.95□□□□□ -0.5
COL1A1-213ENST00000511732 KLK15Q9H2R5 256 aa11.95□□□□□ -0.5
COL1A1-213ENST00000511732 AK6Q9Y3D8 172 aaKnown RBP11.95□□□□□ -0.5
COL1A1-213ENST00000511732 LRRC42Q9Y546 428 aa11.95□□□□□ -0.5
COL1A1-213ENST00000511732 WSB1Q9Y6I7 421 aa11.95□□□□□ -0.5
COL1A1-213ENST00000511732 IGHV7-81A0A0B4J1V7 117 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 FOXI3A8MTJ6 420 aaPredicted RBP11.94□□□□□ -0.5
COL1A1-213ENST00000511732 ATP6V0E1O15342 81 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 NBR2O15453 112 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 RGS11O94810 467 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 HLA-DRB1P01911 266 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 LUMP51884 338 aaPredicted RBP11.94□□□□□ -0.5
COL1A1-213ENST00000511732 TPBGQ13641 420 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 P2RY14Q15391 338 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 FAM89BQ8N5H3 189 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 NPBQ8NG41 125 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 OR8U1Q8NH10 309 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 SETD6Q8TBK2 473 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 OR51J1Q9H342 316 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 PLEKHJ1Q9NW61 149 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 ABRACLQ9P1F3 81 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 AK3Q9UIJ7 227 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 TPRKBQ9Y3C4 175 aa11.94□□□□□ -0.5
COL1A1-213ENST00000511732 SLC17A2O00624 439 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 NDUFA3O95167 84 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 HSMCR30P0CW71 290 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 CT45A6P0DMU7 189 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 CT45A5P0DMU8 189 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 CT45A7P0DMV0 189 aa11.93□□□□□ -0.5
COL1A1-213ENST00000511732 TMEM50BP56557 158 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms