RNA–Protein interactions for RNA: ENST00000511642.5

CCND3-215, Transcript of cyclin D3, human

TSL 2 BASIC

Gene CCND3, Length 2,394 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-215	ENST00000511642	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	YIF1A	O95070	293 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	BCL2	P10415	239 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	SLC25A24	Q6NUK1	477 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	SCCPDH	Q8NBX0	429 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	MDS2	Q8NDY4	140 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	GPR87	Q9BY21	358 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	OR51M1	Q9H341	326 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	MBNL3	Q9NUK0	354 aa	Known RBP	11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	OR14J1	Q9UGF5	321 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	C21orf140	B9A014	251 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	CELA3B	P08861	270 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	LRRC75B	Q2VPJ9	315 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	ZNF787	Q6DD87	383 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	DRAM1	Q8N682	238 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	RCC1L	Q96I51	464 aa	Known RBP	11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	RTL8A	Q9BWD3	113 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	LIN7C	Q9NUP9	197 aa	Known RBP	11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	MIOX	Q9UGB7	285 aa		11.63	□□□□□ -0.55
CCND3-215	ENST00000511642	MED12L	Q86YW9	2145 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	VSTM5	A8MXK1	200 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	SP1	P08047	785 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	ZNF883	P0CG24	379 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	CD200	P41217	278 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	FBXW9	Q5XUX1	488 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	LCN15	Q6UWW0	184 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	SCGB1C1	Q8TD33	95 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	CA5BP1	Q8WTZ4	195 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	EDARADD	Q8WWZ3	215 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	KCNS2	Q9ULS6	477 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	WIPI2	Q9Y4P8	454 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	DNAJC13	O75165	2243 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	ZFP92	A6NM28	416 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	SMPD2	O60906	423 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	WDR1	O75083	606 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	PGA5	P0DJD9	388 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	FGF8	P55075	233 aa	Predicted RBP	11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	RAB11A	P62491	216 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	ALKBH6	Q3KRA9	238 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	ACSF3	Q4G176	576 aa	Predicted RBP	11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	TMEM9B	Q9NQ34	198 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	DOK5	Q9P104	306 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	IL17B	Q9UHF5	180 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	TRAPPC2L	Q9UL33	140 aa		11.62	□□□□□ -0.55
CCND3-215	ENST00000511642	CDX1	P47902	265 aa	Predicted RBP	11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	ERVS71-1	P61550	626 aa		11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	ZNF146	Q15072	292 aa		11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	ZNF674	Q2M3X9	581 aa		11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	ZNF610	Q8N9Z0	462 aa		11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	NANOS1	Q8WY41	292 aa	Known RBP	11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	C5orf30	Q96GV9	206 aa		11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	WDYHV1	Q96HA8	205 aa		11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	DOCK7	Q96N67	2140 aa		11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	OR4C12	Q96R67	309 aa		11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	WDR61	Q9GZS3	305 aa	Known RBP	11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	SPRR3	Q9UBC9	169 aa		11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	IGHV2-70	P01814	119 aa		11.61	□□□□□ -0.55
CCND3-215	ENST00000511642		Q8IYB0	196 aa		11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	GUCD1	Q96NT3	240 aa		11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	OR2J1	Q9GZK6	312 aa		11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.61	□□□□□ -0.55
CCND3-215	ENST00000511642	ZDBF2	Q9HCK1	2354 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642		B4DEV8	164 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	CDIPT	O14735	213 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	HIST1H2BK	O60814	126 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	HIST1H2BJ	P06899	126 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	HIST1H2BO	P23527	126 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	HIST1H2BB	P33778	126 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	PLA2G5	P39877	138 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	CEACAM6	P40199	344 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	MPL	P40238	635 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	HIST1H2BD	P58876	126 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	HIST1H2BC	P62807	126 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	SERF2	P84101	59 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	HIST2H2BE	Q16778	126 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	RNFT1	Q5M7Z0	435 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	SPNS3	Q6ZMD2	512 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	HIST1H2BH	Q93079	126 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	HIST1H2BN	Q99877	126 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	HIST1H2BM	Q99879	126 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	GGACT	Q9BVM4	153 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	RNF150	Q9ULK6	438 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	POLDIP2	Q9Y2S7	368 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	RBM7	Q9Y580	266 aa	Known RBP	11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	MED13	Q9UHV7	2174 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	IGHV3-64D	A0A0J9YX35	117 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642		J3KRW8	73 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642		P0C879	139 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	SELE	P16581	610 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	RND2	P52198	227 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	NDUFA6	P56556	154 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	HBG1	P69891	147 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	HBG2	P69892	147 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	SLC10A1	Q14973	349 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	TBC1D28	Q2M2D7	210 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	TMEM41B	Q5BJD5	291 aa		11.6	□□□□□ -0.55
CCND3-215	ENST00000511642	ZNF766	Q5HY98	468 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms