RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 LSAMPQ13449 338 aa18.11■□□□□ 0.49
SNF8-209ENST00000510558 OR2W3Q7Z3T1 314 aa18.11■□□□□ 0.49
SNF8-209ENST00000510558 ODF3L1Q8IXM7 274 aa18.11■□□□□ 0.49
SNF8-209ENST00000510558 SVOPQ8N4V2 548 aa18.11■□□□□ 0.49
SNF8-209ENST00000510558 CNBD2Q96M20 576 aa18.11■□□□□ 0.49
SNF8-209ENST00000510558 YPEL2Q96QA6 119 aa18.11■□□□□ 0.49
SNF8-209ENST00000510558 RASL11BQ9BPW5 248 aa18.11■□□□□ 0.49
SNF8-209ENST00000510558 LPAR5Q9H1C0 372 aa18.11■□□□□ 0.49
SNF8-209ENST00000510558 CHMP1AQ9HD42 196 aaPredicted RBP18.11■□□□□ 0.49
SNF8-209ENST00000510558 NECAP2Q9NVZ3 263 aa18.11■□□□□ 0.49
SNF8-209ENST00000510558 PLEKHJ1Q9NW61 149 aa18.11■□□□□ 0.49
SNF8-209ENST00000510558 ABRACLQ9P1F3 81 aa18.11■□□□□ 0.49
SNF8-209ENST00000510558 NAPSAO96009 420 aa18.1■□□□□ 0.49
SNF8-209ENST00000510558 ARSBP15848 533 aa18.1■□□□□ 0.49
SNF8-209ENST00000510558 F2RL1P55085 397 aa18.1■□□□□ 0.49
SNF8-209ENST00000510558 FABP5Q01469 135 aa18.1■□□□□ 0.49
SNF8-209ENST00000510558 LY6G6FQ5SQ64 297 aa18.1■□□□□ 0.49
SNF8-209ENST00000510558 FOXB2Q5VYV0 432 aa18.1■□□□□ 0.49
SNF8-209ENST00000510558 Q6ZPA2 131 aa18.1■□□□□ 0.49
SNF8-209ENST00000510558 COMMD1Q8N668 190 aa18.1■□□□□ 0.49
SNF8-209ENST00000510558 URM1Q9BTM9 101 aaKnown RBP18.1■□□□□ 0.49
SNF8-209ENST00000510558 SOCS1O15524 211 aa18.09■□□□□ 0.49
SNF8-209ENST00000510558 CALRP27797 417 aaKnown RBP18.09■□□□□ 0.49
SNF8-209ENST00000510558 TBCEQ15813 527 aaPredicted RBP18.09■□□□□ 0.49
SNF8-209ENST00000510558 RAB11BQ15907 218 aa18.09■□□□□ 0.49
SNF8-209ENST00000510558 ZNF880Q6PDB4 577 aa18.09■□□□□ 0.49
SNF8-209ENST00000510558 FAM71E2Q8N5Q1 922 aa18.09■□□□□ 0.49
SNF8-209ENST00000510558 OR2AK2Q8NG84 335 aa18.09■□□□□ 0.49
SNF8-209ENST00000510558 OR51D1Q8NGF3 324 aa18.09■□□□□ 0.49
SNF8-209ENST00000510558 SETD6Q8TBK2 473 aa18.09■□□□□ 0.49
SNF8-209ENST00000510558 IL1F10Q8WWZ1 152 aa18.09■□□□□ 0.49
SNF8-209ENST00000510558 MRPL20Q9BYC9 149 aaKnown RBP18.09■□□□□ 0.49
SNF8-209ENST00000510558 ZFP57Q9NU63 452 aa18.09■□□□□ 0.49
SNF8-209ENST00000510558 ETV3LQ6ZN32 361 aa18.08■□□□□ 0.48
SNF8-209ENST00000510558 C18orf65Q6ZTR6 163 aa18.08■□□□□ 0.48
SNF8-209ENST00000510558 MOB1BQ7L9L4 216 aa18.08■□□□□ 0.48
SNF8-209ENST00000510558 FAM89BQ8N5H3 189 aa18.08■□□□□ 0.48
SNF8-209ENST00000510558 LINC00482Q8N8I6 264 aa18.08■□□□□ 0.48
SNF8-209ENST00000510558 RCC1LQ96I51 464 aaKnown RBP18.08■□□□□ 0.48
SNF8-209ENST00000510558 HSPB9Q9BQS6 159 aa18.08■□□□□ 0.48
SNF8-209ENST00000510558 AURKAIP1Q9NWT8 199 aaPredicted RBP18.08■□□□□ 0.48
SNF8-209ENST00000510558 NUDT19A8MXV4 375 aa18.07■□□□□ 0.48
SNF8-209ENST00000510558 TEX38Q6PEX7 206 aa18.07■□□□□ 0.48
SNF8-209ENST00000510558 ZNF833PQ6ZTB9 187 aa18.07■□□□□ 0.48
SNF8-209ENST00000510558 NABP2Q9BQ15 211 aa18.07■□□□□ 0.48
SNF8-209ENST00000510558 RIMS4Q9H426 269 aaPredicted RBP18.07■□□□□ 0.48
SNF8-209ENST00000510558 ACOT13Q9NPJ3 140 aa18.07■□□□□ 0.48
SNF8-209ENST00000510558 STEAP1Q9UHE8 339 aa18.07■□□□□ 0.48
SNF8-209ENST00000510558 AK3Q9UIJ7 227 aa18.07■□□□□ 0.48
SNF8-209ENST00000510558 BLOC1S6Q9UL45 172 aa18.07■□□□□ 0.48
SNF8-209ENST00000510558 SAA2-SAA4A0A096LPE2 208 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 TRBV6-6A0A0A6YYG2 114 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 RRP9O43818 475 aaKnown RBP18.06■□□□□ 0.48
SNF8-209ENST00000510558 SAA2P0DJI9 122 aaPredicted RBP18.06■□□□□ 0.48
SNF8-209ENST00000510558 SLC6A1P30531 599 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 SOX6P35712 828 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 OR3A3P47888 321 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 THBS3P49746 956 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 CLDN12P56749 244 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 MMDQ15546 238 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 PNLIPRP3Q17RR3 467 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 C8orf86Q6ZUL3 223 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 ZNF367Q7RTV3 350 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 KLHL30-AS1Q8NEE0 82 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 MRAPQ8TCY5 172 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 HDHD3Q9BSH5 251 aaPredicted RBP18.06■□□□□ 0.48
SNF8-209ENST00000510558 GON7Q9BXV9 100 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 IFI27L2Q9H2X8 130 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 HSF4Q9ULV5 492 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 V9GY05 133 aa18.06■□□□□ 0.48
SNF8-209ENST00000510558 FOXI3A8MTJ6 420 aaPredicted RBP18.05■□□□□ 0.48
SNF8-209ENST00000510558 DUS4LO95620 317 aaKnown RBP18.05■□□□□ 0.48
SNF8-209ENST00000510558 SSX1Q16384 188 aa18.05■□□□□ 0.48
SNF8-209ENST00000510558 MRPL41Q8IXM3 137 aaKnown RBP18.05■□□□□ 0.48
SNF8-209ENST00000510558 FAM3DQ96BQ1 224 aa18.05■□□□□ 0.48
SNF8-209ENST00000510558 RAB26Q9ULW5 256 aa18.05■□□□□ 0.48
SNF8-209ENST00000510558 DNAH3Q8TD57 4116 aa18.04■□□□□ 0.48
SNF8-209ENST00000510558 ST8SIA5O15466 376 aa18.04■□□□□ 0.48
SNF8-209ENST00000510558 SLC2A2P11168 524 aaPredicted RBP18.04■□□□□ 0.48
SNF8-209ENST00000510558 VEGFCP49767 419 aa18.04■□□□□ 0.48
SNF8-209ENST00000510558 TMEM50BP56557 158 aa18.04■□□□□ 0.48
SNF8-209ENST00000510558 ACTBP60709 375 aa18.04■□□□□ 0.48
SNF8-209ENST00000510558 HLA-DRB3P79483 266 aa18.04■□□□□ 0.48
SNF8-209ENST00000510558 FAM71F2Q6NXP2 309 aa18.04■□□□□ 0.48
SNF8-209ENST00000510558 ZNF695Q8IW36 515 aa18.04■□□□□ 0.48
SNF8-209ENST00000510558 ARHGAP5-AS1Q96IT6 56 aa18.04■□□□□ 0.48
SNF8-209ENST00000510558 ZNF107Q9UII5 783 aaPredicted RBP18.04■□□□□ 0.48
SNF8-209ENST00000510558 RPLP1P05386 114 aaKnown RBP18.03■□□□□ 0.48
SNF8-209ENST00000510558 RANBP1P43487 201 aa18.03■□□□□ 0.48
SNF8-209ENST00000510558 PSMD7P51665 324 aa18.03■□□□□ 0.48
SNF8-209ENST00000510558 FOXE3Q13461 319 aa18.03■□□□□ 0.48
SNF8-209ENST00000510558 C2orf76Q3KRA6 126 aa18.03■□□□□ 0.48
SNF8-209ENST00000510558 CXorf66Q5JRM2 361 aaPredicted RBP18.03■□□□□ 0.48
SNF8-209ENST00000510558 RITA1Q96K30 269 aa18.03■□□□□ 0.48
SNF8-209ENST00000510558 ZNF251Q9BRH9 671 aa18.03■□□□□ 0.48
SNF8-209ENST00000510558 PECRQ9BY49 303 aa18.03■□□□□ 0.48
SNF8-209ENST00000510558 PARP12Q9H0J9 701 aaKnown RBP18.03■□□□□ 0.48
SNF8-209ENST00000510558 C12orf4Q9NQ89 552 aa18.03■□□□□ 0.48
SNF8-209ENST00000510558 PIPOXQ9P0Z9 390 aa18.03■□□□□ 0.48
SNF8-209ENST00000510558 SLC23A1Q9UHI7 598 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms