RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 ITLN2Q8WWU7 325 aaPredicted RBP4.33□□□□□ -1.72
PHF3-210ENST00000509876 NEUROG1Q92886 237 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 OR4F4Q96R69 305 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 P2RX4Q99571 388 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 GINS3Q9BRX5 216 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 ASCC3Q8N3C0 2202 aaKnown RBP4.33□□□□□ -1.72
PHF3-210ENST00000509876 A0A0B4J2A0 478 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 ANKRD20A5PA0PJZ0 165 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 KIAA1324LA8MWY0 1029 aaPredicted RBP4.33□□□□□ -1.72
PHF3-210ENST00000509876 OR5AC1P0C628 307 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 FGF7P21781 194 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 DEFB113Q30KQ7 82 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 GNPNAT1Q96EK6 184 aaPredicted RBP4.33□□□□□ -1.72
PHF3-210ENST00000509876 HDHD3Q9BSH5 251 aaPredicted RBP4.33□□□□□ -1.72
PHF3-210ENST00000509876 SRRQ9GZT4 340 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 MAGT1Q9H0U3 335 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 SHPKQ9UHJ6 478 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 EP300Q09472 2414 aaPredicted RBP4.33□□□□□ -1.72
PHF3-210ENST00000509876 HPXP02790 462 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 PAQR4Q8N4S7 273 aaPredicted RBP4.33□□□□□ -1.72
PHF3-210ENST00000509876 ZNF485Q8NCK3 441 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 Q8WTZ3 238 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 OR5B12Q96R08 314 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 ELOVL1Q9BW60 279 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 TLNRD1Q9H1K6 362 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 CACNA1EQ15878 2313 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 TRAV40A0A0B4J280 105 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 SIGLEC5O15389 551 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 CHST1O43916 411 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 NDUFB6O95139 128 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 IL5P05113 134 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 GIPP09681 153 aaPredicted RBP4.33□□□□□ -1.72
PHF3-210ENST00000509876 ID1P41134 155 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 CCDC190Q86UF4 302 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 OR1L4Q8NGR5 311 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 ZNRF4Q8WWF5 429 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 AAMDCQ9H7C9 122 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 PATZ1Q9HBE1 687 aaKnown RBP4.33□□□□□ -1.72
PHF3-210ENST00000509876 J3QLI3 93 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 M0R1W7 72 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 OR13C7P0DN81 318 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 ELLP55199 621 aaPredicted RBP4.32□□□□□ -1.72
PHF3-210ENST00000509876 HIST1H3AP68431 136 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 MPPED2Q15777 294 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 LRRC75BQ2VPJ9 315 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 SP6Q3SY56 376 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 HIST2H3PS2Q5TEC6 136 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 CLEC9AQ6UXN8 241 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 HIST2H3AQ71DI3 136 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 ST8SIA2Q92186 375 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 PLSCR2Q9NRY7 297 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 DUXBA0A1W2PPF3 345 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 ZNF705EA8MWA4 302 aaPredicted RBP4.32□□□□□ -1.72
PHF3-210ENST00000509876 MOSP00540 346 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 PLAUP00749 431 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 COMPP49747 757 aaPredicted RBP4.32□□□□□ -1.72
PHF3-210ENST00000509876 DAZAP2Q15038 168 aaPredicted RBP4.32□□□□□ -1.72
PHF3-210ENST00000509876 RBPMS2Q6ZRY4 209 aaKnown RBP4.32□□□□□ -1.72
PHF3-210ENST00000509876 VMO1Q7Z5L0 202 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 ABHD14BQ96IU4 210 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 ACTR3CQ9C0K3 210 aaPredicted RBP4.32□□□□□ -1.72
PHF3-210ENST00000509876 MTCH1Q9NZJ7 389 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 CORTO00230 105 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 PTHLHP12272 177 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 HIST1H1BP16401 226 aaKnown RBP4.32□□□□□ -1.72
PHF3-210ENST00000509876 PSMB6P28072 239 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 G6PCP35575 357 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 EFNB2P52799 333 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 FAM106AQ4KMX7 169 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 DNM1P46Q6ZS02 220 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 DRAXINQ8NBI3 349 aaPredicted RBP4.32□□□□□ -1.72
PHF3-210ENST00000509876 LYZL4Q96KX0 146 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 OR4C12Q96R67 309 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 KLHDC3Q9BQ90 382 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 TRAF4Q9BUZ4 470 aaPredicted RBP4.32□□□□□ -1.72
PHF3-210ENST00000509876 BPESC1Q9GZL8 116 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 ARV1Q9H2C2 271 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 PPIL3Q9H2H8 161 aaKnown RBP4.32□□□□□ -1.72
PHF3-210ENST00000509876 TMEM133Q9H2Q1 129 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 SERTAD4Q9NUC0 356 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 C10orf142B7Z368 130 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 C1QL1O75973 258 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 VSIG10L2P0DP72 767 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 SLC25A6P12236 298 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 CHATP28329 748 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 P2RY4P51582 365 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 UBE2G1P62253 170 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 ETV3LQ6ZN32 361 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 TMEM104Q8NE00 496 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 SLA2Q9H6Q3 261 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 J3QR06 171 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 PTBP3O95758 552 aaKnown RBP4.32□□□□□ -1.72
PHF3-210ENST00000509876 MSMBP08118 114 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 SCTP09683 121 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 RPL8P62917 257 aaKnown RBP4.32□□□□□ -1.72
PHF3-210ENST00000509876 ATP6V1FQ16864 119 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 GGNBP1Q5YKI7 109 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 PDPNQ86YL7 162 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 Q8NA96 180 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 OR5T1Q8NG75 326 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms