RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 OR1K1Q8NGR3 316 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 TAF15Q92804 592 aaKnown RBP eCLIP7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 POLDIP2Q9Y2S7 368 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 MED12Q93074 2177 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 TRAV20A0A0B4J274 112 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 OR5H1A6NKK0 313 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 TMEM210A6NLX4 147 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 TRAPPC6AO75865 159 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 PGA5P0DJD9 388 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 CEACAM6P40199 344 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 NDUFA6P56556 154 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 ZNF766Q5HY98 468 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 SPNS3Q6ZMD2 512 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 TUSC5Q8IXB3 177 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 RTL8AQ9BWD3 113 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 GPR87Q9BY21 358 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 CHODLQ9H9P2 273 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 MANBALQ9NQG1 85 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 LRFN1Q9P244 771 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 GNG13Q9P2W3 67 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 SZT2Q5T011 3432 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 RANBP2P49792 3224 aaKnown RBP7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 VENTXO95231 258 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 NGFP01138 241 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 NKX6-1P78426 367 aaPredicted RBP7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 SSX7Q7RTT5 188 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 TIPARPQ7Z3E1 657 aaKnown RBP7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 C5orf24Q7Z6I8 188 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 NANOS1Q8WY41 292 aaKnown RBP7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 ZNF665Q9H7R5 613 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 CTXND1A0A1B0GTU2 59 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 FAM90A9PA6NNJ1 464 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 VSTM5A8MXK1 200 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 C21orf140B9A014 251 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 MKRN2OSH3BPM6 223 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 DVL1O14640 695 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 CYB5BO43169 146 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 TRGC2P03986 189 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 SOD3P08294 240 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 TRGC1P0CF51 173 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 PDLIM3Q53GG5 364 aaPredicted RBP7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 ZNF645Q8N7E2 425 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 FRZBQ92765 325 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 OR4C12Q96R67 309 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 FSCN3Q9NQT6 498 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 OR1A1Q9P1Q5 309 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 A0A1B0GWJ7 208 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 MAP1LC3B2A6NCE7 125 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 IL18BPO95998 194 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 CD99P14209 185 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 RAC2P15153 192 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 TUBG1P23258 451 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 OTX2P32243 289 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 RAB11AP62491 216 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 TNFRSF9Q07011 255 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 TMEM267Q0VDI3 215 aaPredicted RBP7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 NEK7Q8TDX7 302 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 IMMP2LQ96T52 175 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 RSG1Q9BU20 258 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 TMEM147Q9BVK8 224 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 BCL2L14Q9BZR8 327 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 MAP1LC3BQ9GZQ8 125 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 VSIRQ9H7M9 311 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 TUBG2Q9NRH3 451 aa7.79□□□□□ -1.16
PDGFRA-208ENST00000509490 A0A1B0GV50 99 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 SMCO3A2RU48 225 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 IQCF6A8MYZ5 107 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 FOXG1P55316 489 aaPredicted RBP7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 GNB2P62879 340 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 MEF2BQ02080 365 aaPredicted RBP7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 SLC35E4Q6ICL7 350 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 WDR86Q86TI4 376 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 TMEM183AQ8IXX5 376 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 DRAM1Q8N682 238 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 NAXEQ8NCW5 288 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 OR10A7Q8NGE5 316 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 OR51H1Q8NH63 302 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 RAB1CQ92928 201 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 ANAPC16Q96DE5 110 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 ACY3Q96HD9 319 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 TTTY12Q9BZ98 90 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 KCNIP1Q9NZI2 227 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 LAMP3Q9UQV4 416 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 LOXL2Q9Y4K0 774 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 ARHGAP21Q5T5U3 1957 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 RAB29O14966 203 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 TNFSF12O43508 249 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 GGCTO75223 188 aaKnown RBP7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 OR2H2O95918 312 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 PKIAP61925 76 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 SLC38A11Q08AI6 406 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 RPP25LQ8N5L8 163 aaKnown RBP7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 BTF3L4Q96K17 158 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 CIB3Q96Q77 187 aaPredicted RBP7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 GPHA2Q96T91 129 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 ACTR3CQ9C0K3 210 aaPredicted RBP7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 ABI3Q9P2A4 366 aa7.78□□□□□ -1.16
PDGFRA-208ENST00000509490 A0A1W2PR80 420 aa7.77□□□□□ -1.16
PDGFRA-208ENST00000509490 METTL15P1P0C7V9 234 aa7.77□□□□□ -1.16
PDGFRA-208ENST00000509490 SELEP16581 610 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms