RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 DDTP30046 118 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 TGFBR1P36897 503 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 HSPA9P38646 679 aaKnown RBP1.3□□□□□ -2.2
XRCC4-204ENST00000509268 RPL5P46777 297 aaKnown RBP1.3□□□□□ -2.2
XRCC4-204ENST00000509268 MARCKSL1P49006 195 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 PSMB3P49720 205 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 CCR6P51684 374 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 LINC00313P59037 77 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 TAS2R41P59536 307 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 ESRRGP62508 458 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 SYCNQ0VAF6 134 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 POU6F1Q14863 301 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 ABCA11PQ4W5N1 156 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 LIN52Q52LA3 116 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 PYCR3Q53H96 274 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 YIF1BQ5BJH7 314 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 FAM78AQ5JUQ0 283 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 TEX30Q5JUR7 227 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 FAM201AQ5SY85 155 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 TRIQKQ629K1 86 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 FAM71E1Q6IPT2 247 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 LAIR2Q6ISS4 152 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 PCP2Q8IVA1 136 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 Q8N9W7 124 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 SCGB1C1Q8TD33 95 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 APOBEC3DQ96AK3 386 aaPredicted RBP1.3□□□□□ -2.2
XRCC4-204ENST00000509268 CPNE2Q96FN4 548 aaPredicted RBP1.3□□□□□ -2.2
XRCC4-204ENST00000509268 CEP170P1Q96L14 293 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 DERL3Q96Q80 235 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 OR2V2Q96R30 315 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 MS4A8Q9BY19 250 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 PCBD2Q9H0N5 130 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 RNASE7Q9H1E1 156 aaKnown RBP1.3□□□□□ -2.2
XRCC4-204ENST00000509268 BOLA2Q9H3K6 86 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 HES4Q9HCC6 221 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 C19orf12Q9NSK7 152 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 DDX19AQ9NUU7 478 aaKnown RBP1.3□□□□□ -2.2
XRCC4-204ENST00000509268 CMTM6Q9NX76 183 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 TAS2R1Q9NYW7 299 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 MRPL27Q9P0M9 148 aaKnown RBP1.3□□□□□ -2.2
XRCC4-204ENST00000509268 NEU3Q9UQ49 428 aa1.3□□□□□ -2.2
XRCC4-204ENST00000509268 FAM32AQ9Y421 112 aaKnown RBP1.3□□□□□ -2.2
XRCC4-204ENST00000509268 CHD2O14647 1828 aaKnown RBP1.3□□□□□ -2.2
XRCC4-204ENST00000509268 ZNFX1Q9P2E3 1918 aaKnown RBP1.29□□□□□ -2.2
XRCC4-204ENST00000509268 FCGBPQ9Y6R7 5405 aaPredicted RBP1.29□□□□□ -2.2
XRCC4-204ENST00000509268 NOS1P29475 1434 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 WRNQ14191 1432 aaPredicted RBP eCLIP1.29□□□□□ -2.2
XRCC4-204ENST00000509268 IGHV3-49A0A0A0MS15 119 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 TMED7-TICAM2A0A0A6YYA0 188 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 FAM236DA0A1B0GTK5 79 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 PQLC2LA1A4F0 135 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 K7EPK0 472 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 FAAHO00519 579 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 COPEO14579 308 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 MRASO14807 208 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 EIF1BO60739 113 aaKnown RBP1.29□□□□□ -2.2
XRCC4-204ENST00000509268 PFN1P07737 140 aaKnown RBP1.29□□□□□ -2.2
XRCC4-204ENST00000509268 FBP1P09467 338 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 NBEAP1P0C6P0 100 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 ZNF688P0C7X2 276 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 ZNF806P0C7X5 589 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 FAM236CP0DP71 79 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 CD79AP11912 226 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 GTF2F2P13984 249 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 CTLA4P16410 223 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 NELFEP18615 380 aaKnown RBP1.29□□□□□ -2.2
XRCC4-204ENST00000509268 EIF1P41567 113 aaKnown RBP1.29□□□□□ -2.2
XRCC4-204ENST00000509268 RPS10P46783 165 aaKnown RBP1.29□□□□□ -2.2
XRCC4-204ENST00000509268 INPP1P49441 399 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 HERVK_113P63121 156 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 HIST1H3AP68431 136 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 BTN3A2P78410 334 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 H3F3AP84243 136 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 EBPQ15125 230 aaKnown RBP1.29□□□□□ -2.2
XRCC4-204ENST00000509268 LUZP6Q538Z0 58 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 FAM78BQ5VT40 261 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 EBLN2Q6P2I7 272 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 MORN3Q6PF18 240 aaPredicted RBP1.29□□□□□ -2.2
XRCC4-204ENST00000509268 HIST2H3AQ71DI3 136 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 TCF23Q7RTU1 214 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 DPPA2Q7Z7J5 298 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 LINC01551Q86U37 167 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 PHF13Q86YI8 300 aaPredicted RBP1.29□□□□□ -2.2
XRCC4-204ENST00000509268 ORMDL3Q8N138 153 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 TMEM256Q8N2U0 113 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 SMIM20Q8N5G0 67 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 DEFB125Q8N687 156 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 UBL4BQ8N7F7 174 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 ZDHHC22Q8N966 263 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 OR5W2Q8NH69 310 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 RASSF5Q8WWW0 418 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 PYDC1Q8WXC3 89 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 KLK6Q92876 244 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 MAL2Q969L2 176 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 PDXPQ96GD0 296 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 DCUN1D1Q96GG9 259 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 SLC25A44Q96H78 314 aaPredicted RBP1.29□□□□□ -2.2
XRCC4-204ENST00000509268 SFRP2Q96HF1 295 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 REEP6Q96HR9 211 aa1.29□□□□□ -2.2
XRCC4-204ENST00000509268 IMMP1LQ96LU5 166 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms