RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 RCC2Q9P258 522 aaKnown RBP12.28□□□□□ -0.44
CXCL1-202ENST00000509101 ERGIC3Q9Y282 383 aa12.28□□□□□ -0.44
CXCL1-202ENST00000509101 ORC6Q9Y5N6 252 aa12.28□□□□□ -0.44
CXCL1-202ENST00000509101 SNTNA6NMZ2 147 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 MCRIP1C9JLW8 97 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 NDUFA3O95167 84 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 IGLV1-51P01701 117 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 HSPB1P04792 205 aaKnown RBP12.27□□□□□ -0.45
CXCL1-202ENST00000509101 GTF2F2P13984 249 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 PPP1CCP36873 323 aaKnown RBP12.27□□□□□ -0.45
CXCL1-202ENST00000509101 GTF2A1P52655 376 aaPredicted RBP12.27□□□□□ -0.45
CXCL1-202ENST00000509101 CRIP2P52943 208 aaPredicted RBP12.27□□□□□ -0.45
CXCL1-202ENST00000509101 MORN2Q502X0 79 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 TRAT1Q6PIZ9 186 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 ANKRD13BQ86YJ7 626 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 NPBQ8NG41 125 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 OR52L2PQ8NGH6 319 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 GPR148Q8TDV2 347 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 FLYWCH2Q96CP2 140 aaKnown RBP12.27□□□□□ -0.45
CXCL1-202ENST00000509101 ORAI1Q96D31 301 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 CYYR1Q96J86 154 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 ELOVL1Q9BW60 279 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 KRTAP17-1Q9BYP8 105 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 SPACA1Q9HBV2 294 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 TMEM138Q9NPI0 162 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 OR2S2Q9NQN1 319 aa12.27□□□□□ -0.45
CXCL1-202ENST00000509101 ZNF780AO75290 641 aaPredicted RBP12.26□□□□□ -0.45
CXCL1-202ENST00000509101 GABRB1P18505 474 aa12.26□□□□□ -0.45
CXCL1-202ENST00000509101 BDKRB2P30411 391 aa12.26□□□□□ -0.45
CXCL1-202ENST00000509101 OR3A3P47888 321 aa12.26□□□□□ -0.45
CXCL1-202ENST00000509101 TPPP2P59282 170 aa12.26□□□□□ -0.45
CXCL1-202ENST00000509101 HAGHQ16775 308 aa12.26□□□□□ -0.45
CXCL1-202ENST00000509101 STEAP3Q658P3 488 aa12.26□□□□□ -0.45
CXCL1-202ENST00000509101 RAB12Q6IQ22 244 aa12.26□□□□□ -0.45
CXCL1-202ENST00000509101 C5orf24Q7Z6I8 188 aa12.26□□□□□ -0.45
CXCL1-202ENST00000509101 TCTEX1D1Q8N7M0 179 aa12.26□□□□□ -0.45
CXCL1-202ENST00000509101 MS4A10Q96PG2 267 aa12.26□□□□□ -0.45
CXCL1-202ENST00000509101 FBXL15Q9H469 300 aa12.26□□□□□ -0.45
CXCL1-202ENST00000509101 TAF9BQ9HBM6 251 aa12.26□□□□□ -0.45
CXCL1-202ENST00000509101 GMPPBQ9Y5P6 360 aa12.26□□□□□ -0.45
CXCL1-202ENST00000509101 SAA2-SAA4A0A096LPE2 208 aa12.25□□□□□ -0.45
CXCL1-202ENST00000509101 FADS2O95864 444 aaKnown RBP12.25□□□□□ -0.45
CXCL1-202ENST00000509101 IFNA6P05013 189 aa12.25□□□□□ -0.45
CXCL1-202ENST00000509101 SAA2P0DJI9 122 aaPredicted RBP12.25□□□□□ -0.45
CXCL1-202ENST00000509101 CX3CL1P78423 397 aa12.25□□□□□ -0.45
CXCL1-202ENST00000509101 PLGLAQ15195 96 aa12.25□□□□□ -0.45
CXCL1-202ENST00000509101 RCN1Q15293 331 aa12.25□□□□□ -0.45
CXCL1-202ENST00000509101 ZNF660Q6AZW8 331 aaPredicted RBP12.25□□□□□ -0.45
CXCL1-202ENST00000509101 XAF1Q6GPH4 301 aa12.25□□□□□ -0.45
CXCL1-202ENST00000509101 PYHIN1Q6K0P9 492 aa12.25□□□□□ -0.45
CXCL1-202ENST00000509101 FAM131AQ6UXB0 335 aa12.25□□□□□ -0.45
CXCL1-202ENST00000509101 ZNF833PQ6ZTB9 187 aa12.25□□□□□ -0.45
CXCL1-202ENST00000509101 GAPTQ8N292 157 aa12.25□□□□□ -0.45
CXCL1-202ENST00000509101 ZNF184Q99676 751 aaPredicted RBP12.25□□□□□ -0.45
CXCL1-202ENST00000509101 FAM103A1Q9BTL3 118 aaKnown RBP12.25□□□□□ -0.45
CXCL1-202ENST00000509101 RETNQ9HD89 108 aa12.25□□□□□ -0.45
CXCL1-202ENST00000509101 AMBNQ9NP70 447 aa12.25□□□□□ -0.45
CXCL1-202ENST00000509101 JPT1Q9UK76 154 aa12.25□□□□□ -0.45
CXCL1-202ENST00000509101 LOC100130705A0A1B0GUX0 176 aa12.24□□□□□ -0.45
CXCL1-202ENST00000509101 EGR2P11161 476 aaPredicted RBP12.24□□□□□ -0.45
CXCL1-202ENST00000509101 RIPK1Q13546 671 aa12.24□□□□□ -0.45
CXCL1-202ENST00000509101 ACTBL2Q562R1 376 aa12.24□□□□□ -0.45
CXCL1-202ENST00000509101 UNQ5815/PRO19632Q6UWF5 114 aa12.24□□□□□ -0.45
CXCL1-202ENST00000509101 MRPS24Q96EL2 167 aaKnown RBP12.24□□□□□ -0.45
CXCL1-202ENST00000509101 GAB2Q9UQC2 676 aa12.24□□□□□ -0.45
CXCL1-202ENST00000509101 NUBP2Q9Y5Y2 271 aa12.24□□□□□ -0.45
CXCL1-202ENST00000509101 PEX16Q9Y5Y5 336 aa12.24□□□□□ -0.45
CXCL1-202ENST00000509101 FRAS1Q86XX4 4008 aa12.23□□□□□ -0.45
CXCL1-202ENST00000509101 UBE2QL1A1L167 161 aa12.23□□□□□ -0.45
CXCL1-202ENST00000509101 RRHO14718 337 aa12.23□□□□□ -0.45
CXCL1-202ENST00000509101 TMEM267Q0VDI3 215 aaPredicted RBP12.23□□□□□ -0.45
CXCL1-202ENST00000509101 CD200R1LQ6Q8B3 271 aa12.23□□□□□ -0.45
CXCL1-202ENST00000509101 PPP1R27Q86WC6 154 aa12.23□□□□□ -0.45
CXCL1-202ENST00000509101 OR52I1Q8NGK6 324 aa12.23□□□□□ -0.45
CXCL1-202ENST00000509101 OR13C5Q8NGS8 318 aa12.23□□□□□ -0.45
CXCL1-202ENST00000509101 RHOXF1Q8NHV9 184 aa12.23□□□□□ -0.45
CXCL1-202ENST00000509101 APH1BQ8WW43 257 aa12.23□□□□□ -0.45
CXCL1-202ENST00000509101 MUL1Q969V5 352 aa12.23□□□□□ -0.45
CXCL1-202ENST00000509101 RHOVQ96L33 236 aa12.23□□□□□ -0.45
CXCL1-202ENST00000509101 FAM110AQ9BQ89 295 aa12.23□□□□□ -0.45
CXCL1-202ENST00000509101 TMED9Q9BVK6 235 aa12.23□□□□□ -0.45
CXCL1-202ENST00000509101 KCNIP1Q9NZI2 227 aa12.23□□□□□ -0.45
CXCL1-202ENST00000509101 RNF150Q9ULK6 438 aa12.23□□□□□ -0.45
CXCL1-202ENST00000509101 FCN1O00602 326 aa12.22□□□□□ -0.45
CXCL1-202ENST00000509101 ARPC1BO15143 372 aaKnown RBP12.22□□□□□ -0.45
CXCL1-202ENST00000509101 SC5DO75845 299 aa12.22□□□□□ -0.45
CXCL1-202ENST00000509101 MAS1P04201 325 aa12.22□□□□□ -0.45
CXCL1-202ENST00000509101 RAB40BQ12829 278 aa12.22□□□□□ -0.45
CXCL1-202ENST00000509101 GPR176Q14439 515 aa12.22□□□□□ -0.45
CXCL1-202ENST00000509101 GLIPR1L1Q6UWM5 242 aa12.22□□□□□ -0.45
CXCL1-202ENST00000509101 OR2AK2Q8NG84 335 aa12.22□□□□□ -0.45
CXCL1-202ENST00000509101 CLCC1Q96S66 551 aa12.22□□□□□ -0.45
CXCL1-202ENST00000509101 IFI27L2Q9H2X8 130 aa12.22□□□□□ -0.45
CXCL1-202ENST00000509101 BANF2Q9H503 90 aa12.22□□□□□ -0.45
CXCL1-202ENST00000509101 TUBA4BQ9H853 241 aa12.22□□□□□ -0.45
CXCL1-202ENST00000509101 MBNL3Q9NUK0 354 aaKnown RBP12.22□□□□□ -0.45
CXCL1-202ENST00000509101 SMPD3Q9NY59 655 aaPredicted RBP12.22□□□□□ -0.45
CXCL1-202ENST00000509101 CNOT2Q9NZN8 540 aaKnown RBP12.22□□□□□ -0.45
CXCL1-202ENST00000509101 ERICH4A6NGS2 130 aa12.21□□□□□ -0.45
CXCL1-202ENST00000509101 YPEL1O60688 119 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms