RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 NPTNQ9Y639 398 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 KIAA2026Q5HYC2 2103 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 SORL1Q92673 2214 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 DSPPQ9NZW4 1301 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 TNCP24821 2201 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 STK16O75716 305 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 YIF1AO95070 293 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 APCSP02743 223 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 IFNW1P05000 195 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 ZNF250P15622 560 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 GABRA3P34903 492 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 MPV17P39210 176 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 EIF1P41567 113 aaKnown RBP2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 SLC1A1P43005 524 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 HNMTP50135 292 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 ATP1B3P54709 279 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 UBE2NP61088 152 aaKnown RBP2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 SELENBP1Q13228 472 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 KLRD1Q13241 179 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 QPRTQ15274 297 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 TMEM107Q6UX40 140 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 LRRN1Q6UXK5 716 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 TEX43Q6ZNM6 134 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 OLIG3Q7RTU3 272 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 COMMD6Q7Z4G1 85 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 Q8N2B8 174 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 COQ8AQ8NI60 647 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 PIFOQ8TCI5 191 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 FAM3DQ96BQ1 224 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 LRRC45Q96CN5 670 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 RBM14Q96PK6 669 aaKnown RBP2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 CAMK2N2Q96S95 79 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 CHP1Q99653 195 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 SLC25A2Q9BXI2 301 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 RETNQ9HD89 108 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 SLC35D1Q9NTN3 355 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 C20orf96Q9NUD7 363 aaPredicted RBP2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 RNF11Q9Y3C5 154 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 LRP1Q07954 4544 aaKnown RBP2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 FAT4Q6V0I7 4981 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 MUC2Q02817 5179 aa2.17□□□□□ -2.06
TOPBP1-206ENST00000508524 H3BUX3 64 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 K7EPI3 171 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 FOXE1O00358 373 aaPredicted RBP2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 BPY2O14599 106 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 GPR171O14626 319 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 PIAS1O75925 651 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 KCNK2O95069 426 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 TPM2P07951 284 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 IL3P08700 152 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 P0C880 135 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 AQP2P41181 271 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 MAGEA3P43357 314 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 MAGEA8P43361 318 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 CDKN1BP46527 198 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 ZNF138P52744 262 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 PRRX1P54821 245 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 AQP5P55064 265 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 HADHBP55084 474 aaKnown RBP2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 KLF3P57682 345 aaPredicted RBP2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 MYL5Q02045 173 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 MERTKQ12866 999 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 SKP2Q13309 424 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 TMEM155Q4W5P6 130 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 C3orf33Q6P1S2 294 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 AAED1Q7RTV5 226 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 DHDDSQ86SQ9 333 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 CALHM1Q8IU99 346 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 SPICQ8N5J4 248 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 ZNF283Q8N7M2 679 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 GPATCH11Q8N954 259 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 C19orf18Q8NEA5 215 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 OR9K2Q8NGE7 335 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 OR4C13Q8NGP0 309 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 OR2G2Q8NGZ5 317 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 OR8U1Q8NH10 309 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 PIGXQ8TBF5 258 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 C1orf54Q8WWF1 131 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 LRRC39Q96DD0 335 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 COQ2Q96H96 371 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 P2RX4Q99571 388 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 CDCA4Q9BXL8 241 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 FRMD8P1Q9BZ68 369 aaPredicted RBP2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 SHCBP1LQ9BZQ2 653 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 MFFQ9GZY8 342 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 POLE4Q9NR33 117 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 TMEM106BQ9NUM4 274 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 TAS2R9Q9NYW1 312 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 N6AMT1Q9Y5N5 214 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 BZW2Q9Y6E2 419 aaKnown RBP2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 KCNE3Q9Y6H6 103 aa2.16□□□□□ -2.06
TOPBP1-206ENST00000508524 PKHD1L1Q86WI1 4243 aa2.15□□□□□ -2.06
TOPBP1-206ENST00000508524 A0A1W2PQD3 144 aa2.15□□□□□ -2.07
TOPBP1-206ENST00000508524 TRIM64CA6NLI5 447 aa2.15□□□□□ -2.07
TOPBP1-206ENST00000508524 ZNF879B4DU55 563 aa2.15□□□□□ -2.07
TOPBP1-206ENST00000508524 H0YIV9 168 aa2.15□□□□□ -2.07
TOPBP1-206ENST00000508524 K7EQM0 130 aa2.15□□□□□ -2.07
TOPBP1-206ENST00000508524 PFDN6O15212 129 aa2.15□□□□□ -2.07
TOPBP1-206ENST00000508524 SYNGR1O43759 233 aa2.15□□□□□ -2.07
TOPBP1-206ENST00000508524 EIF3GO75821 320 aaKnown RBP eCLIP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms