RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 ACSM3Q53FZ2 586 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 RNLSQ5VYX0 342 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 UNQ9370/PRO34162Q6UXP9 181 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 ZNF833PQ6ZTB9 187 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 LRRTM1Q86UE6 522 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 MYOZ3Q8TDC0 251 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 KCTD7Q96MP8 289 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 B9D2Q9BPU9 175 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 MND1Q9BWT6 205 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 KCNK15Q9H427 330 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 KCNIP1Q9NZI2 227 aa10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 ZNF107Q9UII5 783 aaPredicted RBP10.17□□□□□ -0.78
HMGCS1-205ENST00000508319 CDK1P06493 297 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 UBBP0CG47 229 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 CNTFRP26992 372 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 OR3A3P47888 321 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 LUMP51884 338 aaPredicted RBP10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 ACTBP60709 375 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 RPS27AP62979 156 aaKnown RBP10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 UNC119Q13432 240 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 FHL3Q13643 280 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 KIR2DS1Q14954 304 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 HMGN3Q15651 99 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 RBM48Q5RL73 367 aaKnown RBP10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 LY6G6FQ5SQ64 297 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 C1orf100Q5SVJ3 147 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 C6orf201Q7Z4U5 140 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 MS4A15Q8N5U1 240 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 C4orf3Q8WVX3 66 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 PHYHIPQ92561 330 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 RITA1Q96K30 269 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 NABP2Q9BQ15 211 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 NICN1Q9BSH3 213 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 TMED9Q9BVK6 235 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 TMEM59Q9BXS4 323 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 IFI27L2Q9H2X8 130 aa10.16□□□□□ -0.78
HMGCS1-205ENST00000508319 YPEL1O60688 119 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 RGS11O94810 467 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 NAPSAO96009 420 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 HLA-DRB1P01911 266 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 OR5H8P0DN80 308 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 HTR2CP28335 458 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 QRFPP83859 136 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 DGCR2P98153 550 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 CD69Q07108 199 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 GLT8D1Q68CQ7 371 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 SVOPQ8N4V2 548 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 OR2AK2Q8NG84 335 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 OR5M8Q8NGP6 311 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 NEDD4LQ96PU5 975 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 YPEL2Q96QA6 119 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 TM2D1Q9BX74 207 aa10.15□□□□□ -0.78
HMGCS1-205ENST00000508319 A0A0A6YYD4 124 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 IGHV7-81A0A0B4J1V7 117 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 TMEM14DPA8MWL7 114 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 G3V318 75 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 SLC22A1O15245 554 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 ATP6V0E1O15342 81 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 NBR2O15453 112 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 CD37P11049 281 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 PPIFP30405 207 aaKnown RBP10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 KIAA0141Q14154 515 aaPredicted RBP10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 SPHARQ15513 63 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 C5orf64Q2M2E5 130 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 FAM71F2Q6NXP2 309 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 ZNF880Q6PDB4 577 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 KCNG3Q8TAE7 436 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 IL1F10Q8WWZ1 152 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 GALMQ96C23 342 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 ZNF251Q9BRH9 671 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 FAAP24Q9BTP7 215 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 ANKRD60Q9BZ19 345 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 KLK15Q9H2R5 256 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 VCXQ9H320 206 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 OR51J1Q9H342 316 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 WSB1Q9Y6I7 421 aa10.14□□□□□ -0.79
HMGCS1-205ENST00000508319 PTGES3LE9PB15 166 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 ST8SIA5O15466 376 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 NDUFA3O95167 84 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 BPNT1O95861 308 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 IGLV1-40P01703 118 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 UCHL1P09936 223 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 SRMP19623 302 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 NDPQ00604 133 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 DCTN2Q13561 401 aaKnown RBP10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 IRF3Q14653 427 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 HSD17B12Q53GQ0 312 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 FAM131AQ6UXB0 335 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 CEACAM19Q7Z692 300 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 NPBQ8NG41 125 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 OR11H1Q8NG94 326 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 OR6M1Q8NGM8 313 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 GFI1Q99684 422 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 CHCHD6Q9BRQ6 235 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 PARP12Q9H0J9 701 aaKnown RBP10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 GNB4Q9HAV0 340 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 PARP11Q9NR21 331 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 ABRACLQ9P1F3 81 aa10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 ZMAT5Q9UDW3 170 aaKnown RBP10.13□□□□□ -0.79
HMGCS1-205ENST00000508319 LRRC42Q9Y546 428 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms