RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ODF3L1Q8IXM7 274 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 DEFB119Q8N690 84 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 SMRP1Q8NCR6 262 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR51G1Q8NGK1 321 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 MRPL30Q8TCC3 161 aaKnown RBP4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 TAF15Q92804 592 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 NAT6Q93015 286 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 NEIL1Q96FI4 390 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 GMPPAQ96IJ6 420 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 RSG1Q9BU20 258 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 LINC00470Q9BZP3 86 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 PKIBQ9C010 78 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 GPR35Q9HC97 309 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 CACNG5Q9UF02 275 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR14J1Q9UGF5 321 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 RBM7Q9Y580 266 aaKnown RBP4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 MPC1Q9Y5U8 109 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 PCNX3Q9H6A9 2034 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 TDRD6O60522 2096 aaKnown RBP4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 IGHV1-45A0A0A0MS14 117 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 IGKV1D-13A0A0B4J2D9 117 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 CCDC163A0A0D9SF12 145 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF716A6NP11 495 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 B4E171 279 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 C2CD4DB7Z1M9 353 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 CLDN1O95832 211 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 GYPAP02724 150 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 RNF224P0DH78 156 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 IGKV1-13P0DP09 117 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 CCL3P10147 92 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 PSG2P11465 335 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 FGF5P12034 268 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR10J1P30954 320 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 TSPAN7P41732 249 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 GPM6AP51674 278 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 CNN1P51911 297 aaKnown RBP4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 MLF1P58340 268 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 ERVFC1-1P60608 527 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 NUTF2P61970 127 aaKnown RBP4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 PPP1CBP62140 327 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 RPL23P62829 140 aaKnown RBP4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 GNG3P63215 75 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 PAFAH1B2P68402 229 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 RPP30P78346 268 aaKnown RBP4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 CCL7P80098 99 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 PLP2Q04941 152 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZFP36L1Q07352 338 aaKnown RBP4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 CATR1Q13166 79 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 HERPUD1Q15011 391 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF726P1Q15940 193 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 MSMPQ1L6U9 139 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 TMEM249Q2WGJ8 235 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 TRIM61Q5EBN2 209 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 FIP1L1Q6UN15 594 aaKnown RBP4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 CALHM1Q8IU99 346 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 FAM58AQ8N1B3 248 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 SLC25A45Q8N413 288 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 GBGT1Q8N5D6 347 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 NAXEQ8NCW5 288 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR56B2PQ8NGI1 322 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR4F5Q8NH21 305 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR51H1Q8NH63 302 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 DNASE2BQ8WZ79 361 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 R3HDM4Q96D70 268 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 CYYR1Q96J86 154 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 IMMP1LQ96LU5 166 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR4C12Q96R67 309 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR4F4Q96R69 305 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 NEU1Q99519 415 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 TMEM204Q9BSN7 226 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 SRXN1Q9BYN0 137 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 KRTAP4-8Q9BYQ9 185 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 MRPL37Q9BZE1 423 aaKnown RBP4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 PARLQ9H300 379 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 RBKSQ9H477 322 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 SH2D2AQ9NP31 389 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 KCNIP2Q9NS61 270 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 KCNIP1Q9NZI2 227 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR6C3Q9NZP0 311 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 KCNS2Q9ULS6 477 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 POLDIP2Q9Y2S7 368 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 RALGAPA1Q6GYQ0 2036 aa4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 ARID1BQ8NFD5 2236 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P16-201ENST00000508037 RP1P56715 2156 aa4.21□□□□□ -1.73
HMGB3P16-201ENST00000508037 IGKV3D-15A0A087WSY6 115 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 IGKV1-6A0A0C4DH72 117 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 IGHV5-10-1A0A0J9YXX1 117 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 UBE2L5PA0A1B0GUS4 154 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 MDFIC2A0A1B0GVS7 189 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 A0A1W2PPQ1 181 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 LRRC3CA6NJW4 275 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 H3BP45 60 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 J3QT63 122 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 TNFSF12O43508 249 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 CXCL13O43927 109 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 MPDU1O75352 247 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 MRPL33O75394 65 aaKnown RBP4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 SCGB1D1O95968 90 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms