RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 C1orf229Q6ZS94 237 aaPredicted RBP11.57□□□□□ -0.56
RNF4-208ENST00000507247 PNKDQ8N490 385 aa11.57□□□□□ -0.56
RNF4-208ENST00000507247 GIMAP1Q8WWP7 306 aa11.57□□□□□ -0.56
RNF4-208ENST00000507247 ZNF2Q9BSG1 426 aaPredicted RBP11.57□□□□□ -0.56
RNF4-208ENST00000507247 TMUB1Q9BVT8 246 aa11.57□□□□□ -0.56
RNF4-208ENST00000507247 IGKV1D-13A0A0B4J2D9 117 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 J3QLI3 93 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 IFNA6P05013 189 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 IGKV1-13P0DP09 117 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 TSPAN5P62079 268 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 CT45A1Q5HYN5 189 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 LY6G6FQ5SQ64 297 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 PDZD9Q8IXQ8 264 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 ABHD12Q8N2K0 398 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 ARRDC1Q8N5I2 433 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 OR51S1Q8NGJ8 323 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 CT45A3Q8NHU0 189 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 DEDD2Q8WXF8 326 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 LHX4Q969G2 390 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 UPRTQ96BW1 309 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 SMR3AQ99954 134 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 CLEC7AQ9BXN2 247 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 FXYD6Q9H0Q3 95 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 C11orf54Q9H0W9 315 aaPredicted RBP11.56□□□□□ -0.56
RNF4-208ENST00000507247 MCUBQ9NWR8 336 aa11.56□□□□□ -0.56
RNF4-208ENST00000507247 TRAV40A0A0B4J280 105 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 OR5H14A6NHG9 310 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 ODF3BA8MYP8 253 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 DISC1C4P0D8 188 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 J3QR06 171 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 ST8SIA5O15466 376 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 LYRM1O43325 122 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 RGS11O94810 467 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 PPYP01298 95 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 FAUP35544 74 aaKnown RBP11.55□□□□□ -0.56
RNF4-208ENST00000507247 ASAH1Q13510 395 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 Q3ZCU0 254 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 SCGB2B2Q4G0G5 96 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 AADACL3Q5VUY0 350 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 SLC25A48Q6ZT89 311 aaKnown RBP11.55□□□□□ -0.56
RNF4-208ENST00000507247 LHFPL1Q86WI0 220 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 OR13D1Q8NGV5 346 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 OR6F1Q8NGZ6 308 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 OR9G1Q8NH87 305 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 ZNF596Q8TC21 504 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 MRGPRFQ96AM1 343 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 C7orf50Q9BRJ6 194 aaKnown RBP11.55□□□□□ -0.56
RNF4-208ENST00000507247 ABHD14AQ9BUJ0 271 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 HEXA-AS1Q9H8Q6 139 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 KCNS2Q9ULS6 477 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 OR2W1Q9Y3N9 320 aa11.55□□□□□ -0.56
RNF4-208ENST00000507247 IGHV3OR16-10A0A075B7F0 116 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 CENPVL3A0A0U1RRI6 287 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 A0A1W2PRD5 423 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 A0A1W2PRF3 423 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 A0A1W2PRM7 423 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 NAP1L6A6NFF2 107 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 ITGB1BP1O14713 200 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 IGLV1-47P01700 117 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 CD99P14209 185 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 FXYD4P59646 89 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 DCTN2Q13561 401 aaKnown RBP11.54□□□□□ -0.56
RNF4-208ENST00000507247 HLA-DRB5Q30154 266 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 KLF17Q5JT82 389 aaPredicted RBP11.54□□□□□ -0.56
RNF4-208ENST00000507247 NCR3LG1Q68D85 454 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 ZNF626Q68DY1 528 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 TMEM17Q86X19 198 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 ODF3L1Q8IXM7 274 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 LINC00311Q8N616 119 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 C8orf31Q8N9H6 132 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 OR2AK2Q8NG84 335 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 OR11H6Q8NGC7 330 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 OR4P4Q8NGL7 312 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 OR13C8Q8NGS7 320 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 MOB3AQ96BX8 217 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 AGMATQ9BSE5 352 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 IFI27L2Q9H2X8 130 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 PALMDQ9NP74 551 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 SLC2A8Q9NY64 477 aa11.54□□□□□ -0.56
RNF4-208ENST00000507247 LY6G6DO95868 133 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 ARG1P05089 322 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 OR8U9P0C7N5 309 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 IGHV4-38-2P0DP08 117 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 CCR6P51684 374 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 LUMP51884 338 aaPredicted RBP11.53□□□□□ -0.56
RNF4-208ENST00000507247 UBE2E1P51965 193 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 RIPPLY3P57055 190 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 HERV-K104P61576 105 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 LDLRAD2Q5SZI1 272 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 RUSC1-AS1Q66K80 236 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 IDO2Q6ZQW0 420 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 BEND2Q8NDZ0 799 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 OR8U1Q8NH10 309 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 SECTM1Q8WVN6 248 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 EDARADDQ8WWZ3 215 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 CREB3L1Q96BA8 519 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 C5orf30Q96GV9 206 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 ABHD14BQ96IU4 210 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 PRRT1Q99946 306 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 MMP28Q9H239 520 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms