RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 SIGLEC9Q9Y336 463 aa10.5□□□□□ -0.73
TCOF1-209ENST00000506630 WNK1Q9H4A3 2382 aa10.5□□□□□ -0.73
TCOF1-209ENST00000506630 RAB27BO00194 218 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 MFNGO00587 321 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 OR2F2O95006 317 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 GAPDHP04406 335 aaKnown RBP10.49□□□□□ -0.73
TCOF1-209ENST00000506630 LPLP06858 475 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 HIST1H1DP16402 221 aaKnown RBP10.49□□□□□ -0.73
TCOF1-209ENST00000506630 ZNF134P52741 427 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 PROK1P58294 105 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 ZNF816Q0VGE8 651 aaPredicted RBP10.49□□□□□ -0.73
TCOF1-209ENST00000506630 ARFRP1Q13795 201 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 CT45A1Q5HYN5 189 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 LYG1Q8N1E2 194 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 OR2AK2Q8NG84 335 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 CT45A3Q8NHU0 189 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 CFHR4Q92496 578 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 AKR1E2Q96JD6 320 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 ZNF702PQ9H963 129 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 Q9N2K0 584 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 SLC23A1Q9UHI7 598 aa10.49□□□□□ -0.73
TCOF1-209ENST00000506630 IGHV1-3A0A0C4DH29 117 aa10.48□□□□□ -0.73
TCOF1-209ENST00000506630 YPEL1O60688 119 aa10.48□□□□□ -0.73
TCOF1-209ENST00000506630 IGKV1D-33P01593 117 aa10.48□□□□□ -0.73
TCOF1-209ENST00000506630 IGKV1-33P01594 117 aa10.48□□□□□ -0.73
TCOF1-209ENST00000506630 FAM106CPP0CH98 169 aa10.48□□□□□ -0.73
TCOF1-209ENST00000506630 KIR2DS4P43632 304 aa10.48□□□□□ -0.73
TCOF1-209ENST00000506630 HABP2Q14520 560 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-209ENST00000506630 STEAP3Q658P3 488 aa10.48□□□□□ -0.73
TCOF1-209ENST00000506630 OR13F1Q8NGS4 319 aa10.48□□□□□ -0.73
TCOF1-209ENST00000506630 FAM110DQ8TAY7 271 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-209ENST00000506630 RTN4IP1Q8WWV3 396 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-209ENST00000506630 RBM14Q96PK6 669 aaKnown RBP10.48□□□□□ -0.73
TCOF1-209ENST00000506630 YPEL2Q96QA6 119 aa10.48□□□□□ -0.73
TCOF1-209ENST00000506630 FUNDC2Q9BWH2 189 aa10.48□□□□□ -0.73
TCOF1-209ENST00000506630 MRPS26Q9BYN8 205 aaKnown RBP10.48□□□□□ -0.73
TCOF1-209ENST00000506630 PRSS22Q9GZN4 317 aa10.48□□□□□ -0.73
TCOF1-209ENST00000506630 RHBDL2Q9NX52 303 aa10.48□□□□□ -0.73
TCOF1-209ENST00000506630 KCNK7Q9Y2U2 307 aa10.48□□□□□ -0.73
TCOF1-209ENST00000506630 IGHV3-72A0A0B4J1Y9 119 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 FAM90A9PA6NNJ1 464 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 SERPINE3A8MV23 424 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 HSPA12AO43301 675 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 TXNL1O43396 289 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 SCGNO76038 276 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 FCGR3AP08637 254 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 SCTP09683 121 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 TMEM11P17152 192 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 TALDO1P37837 337 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 SERPINB10P48595 397 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 BLCAPP62952 87 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 ARL6IP1Q15041 203 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 TGIF2LXQ8IUE1 241 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 DTX3Q8N9I9 347 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 OR5H6Q8NGV6 325 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 MAFIPQ8WZ33 124 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 ST6GALNAC6Q969X2 333 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 OR1A1Q9P1Q5 309 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 MOB4Q9Y3A3 225 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 ETV7Q9Y603 341 aa10.47□□□□□ -0.73
TCOF1-209ENST00000506630 TRDCB7Z8K6 153 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 ST8SIA5O15466 376 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 PEX14O75381 377 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 TSPAN15O95858 294 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 VSIG10L2P0DP72 767 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 ZBTB25P24278 435 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 RPS19P39019 145 aaKnown RBP10.46□□□□□ -0.73
TCOF1-209ENST00000506630 VDAC2P45880 294 aaPredicted RBP10.46□□□□□ -0.73
TCOF1-209ENST00000506630 ZNF137PP52743 207 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 SCAND1P57086 179 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 NCS1P62166 190 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 C2orf68Q2NKX9 166 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 TMEM95Q3KNT9 176 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 LY6G6FQ5SQ64 297 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 C11orf88Q6PI97 169 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 THNSL2Q86YJ6 484 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 CROCCP3Q8IVE0 287 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 KLHDC1Q8N7A1 406 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 PHF21AQ96BD5 680 aa10.46□□□□□ -0.73
TCOF1-209ENST00000506630 ZNF230Q9UIE0 474 aaPredicted RBP10.46□□□□□ -0.73
TCOF1-209ENST00000506630 ELF5Q9UKW6 265 aaPredicted RBP10.46□□□□□ -0.73
TCOF1-209ENST00000506630 SAA2-SAA4A0A096LPE2 208 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 SH2D7A6NKC9 451 aaPredicted RBP10.45□□□□□ -0.74
TCOF1-209ENST00000506630 FABP7O15540 132 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 LANCL1O43813 399 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 SAA2P0DJI9 122 aaPredicted RBP10.45□□□□□ -0.74
TCOF1-209ENST00000506630 VBP1P61758 197 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 HNF4GQ14541 408 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 KIR2DS1Q14954 304 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 CDNFQ49AH0 187 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 ABCA11PQ4W5N1 156 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 C9orf152Q5JTZ5 239 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 Q6ZS46 218 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 ODF3L1Q8IXM7 274 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 IZUMO1Q8IYV9 350 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 Q8N2B8 174 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 OR4A4PQ8NGN8 299 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 EDARADDQ8WWZ3 215 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 SLC25A38Q96DW6 304 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 PARP12Q9H0J9 701 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms