RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 ZNF273Q14593 569 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 C17orf58Q2M2W7 97 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 TMEM30BQ3MIR4 351 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 ZFP69Q49AA0 526 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 ACTBL2Q562R1 376 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 RNASE12Q5GAN4 147 aaKnown RBP5.93□□□□□ -1.46
NUP54-204ENST00000506098 LY6G6FQ5SQ64 297 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 TRIQKQ629K1 86 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 OR52W1Q6IF63 320 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 HEPN1Q6WQI6 88 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 OVCH2Q7RTZ1 564 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 TOMM5Q8N4H5 51 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 C11orf42Q8N5U0 333 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 OR52M1Q8NGK5 317 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 MRGPRDQ8TDS7 321 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 CCDC107Q8WV48 283 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 H1FXQ92522 213 aaKnown RBP5.93□□□□□ -1.46
NUP54-204ENST00000506098 Q96MF0 132 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 ZNF714Q96N38 554 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 C7orf50Q9BRJ6 194 aaKnown RBP5.93□□□□□ -1.46
NUP54-204ENST00000506098 REG4Q9BYZ8 158 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 TAF9BQ9HBM6 251 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 KCNIP1Q9NZI2 227 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 ZANQ9Y493 2812 aa5.93□□□□□ -1.46
NUP54-204ENST00000506098 TRBV6-7A0A0A0MS04 114 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 TRAV39A0A0B4J263 110 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 IGHV2-70DA0A0C4DH43 119 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 IGKV1-6A0A0C4DH72 117 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 A0A1W2PPH5 198 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 A0A1W2PQ09 198 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 RAB19A4D1S5 217 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 NAP1L6A6NFF2 107 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 ZNF736B4DX44 427 aaPredicted RBP5.92□□□□□ -1.46
NUP54-204ENST00000506098 M0R1W7 72 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 FABP7O15540 132 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 SPINT2O43291 252 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 HBZP02008 142 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 CD3DP04234 171 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 FBP1P09467 338 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 ZNF735P0CB33 412 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 AKAIN1P0CW23 69 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 ZNF728P0DKX0 622 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 HRH1P35367 487 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 GLP1RP43220 463 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 LOXL3P58215 753 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 ASAH1Q13510 395 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 MEF2DQ14814 521 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 HERPUD1Q15011 391 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 CHRFAM7AQ494W8 412 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 VAX1Q5SQQ9 334 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 STEAP3Q658P3 488 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 STEAP1BQ6NZ63 245 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 DHRS11Q6UWP2 260 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 C5orf24Q7Z6I8 188 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 KIR3DL3Q8N743 410 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 WFDC11Q8NEX6 87 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 OR4C16Q8NGL9 310 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 SETD6Q8TBK2 473 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 MAFIPQ8WZ33 124 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 ARL11Q969Q4 196 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 GALMQ96C23 342 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 NEU1Q99519 415 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 GAL3ST2Q9H3Q3 398 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 BIN3Q9NQY0 253 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 ABCB10Q9NRK6 738 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 NECAP2Q9NVZ3 263 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 CALYQ9NYX4 217 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 IDI2-AS1Q9NZ38 188 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 TBC1D24Q9ULP9 559 aa5.92□□□□□ -1.46
NUP54-204ENST00000506098 FLNBO75369 2602 aaKnown RBP5.91□□□□□ -1.46
NUP54-204ENST00000506098 A0A087X0M5 115 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 A0A1B0GX30 115 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 B4DSR2 109 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 RNF223E7ERA6 249 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 ITGB1BP1O14713 200 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 ENSAO43768 121 aaKnown RBP5.91□□□□□ -1.46
NUP54-204ENST00000506098 YPEL1O60688 119 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 TUSC2O75896 110 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 RAB3DO95716 219 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 IFNA2P01563 188 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 PMP2P02689 132 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 H2AFB1P0C5Y9 115 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 H2AFB2P0C5Z0 115 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 CCL3L1P16619 93 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 FPR2P25090 351 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 HLA-DMAP28067 261 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 SSTR5P35346 364 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 FAUP35544 74 aaKnown RBP5.91□□□□□ -1.46
NUP54-204ENST00000506098 RFX2P48378 723 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 INPP1P49441 399 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 LCN2P80188 198 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 PAX8Q06710 450 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 SMCO1Q147U7 214 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 SSX2Q16385 188 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 RNASE10Q5GAN6 216 aaKnown RBP5.91□□□□□ -1.46
NUP54-204ENST00000506098 ZNF57Q68EA5 555 aaPredicted RBP5.91□□□□□ -1.46
NUP54-204ENST00000506098 ZNF660Q6AZW8 331 aaPredicted RBP5.91□□□□□ -1.46
NUP54-204ENST00000506098 ZNF782Q6ZMW2 699 aaPredicted RBP5.91□□□□□ -1.46
NUP54-204ENST00000506098 LHFPL1Q86WI0 220 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 FAM185AQ8N0U4 392 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms