RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 DHODHQ02127 395 aa6.67□□□□□ -1.34
CDC42SE2-208ENST00000505065 RTN4IP1Q8WWV3 396 aaPredicted RBP6.67□□□□□ -1.34
CDC42SE2-208ENST00000505065 S100ZQ8WXG8 99 aa6.67□□□□□ -1.34
CDC42SE2-208ENST00000505065 ZNF69Q9UC07 566 aa6.67□□□□□ -1.34
CDC42SE2-208ENST00000505065 SPINT2O43291 252 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 ZBTB25P24278 435 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 KLRD1Q13241 179 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 SURF2Q15527 256 aaPredicted RBP6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 AARDQ4LEZ3 155 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 ABHD12Q8N2K0 398 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 ZDHHC22Q8N966 263 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 BEST4Q8NFU0 473 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 ARL11Q969Q4 196 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 C11orf54Q9H0W9 315 aaPredicted RBP6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 PLSCR3Q9NRY6 295 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 OR2W1Q9Y3N9 320 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 NDUFA3O95167 84 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 SAA4P35542 130 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 ACTBP60709 375 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 ACTG1P63261 375 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 EDDM3AQ14507 147 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 NKAPLQ5M9Q1 402 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 OR8H3Q8N146 312 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 ZBTB34Q8NCN2 500 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 NPBQ8NG41 125 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 OR52L2PQ8NGH6 319 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 C17orf50Q8WW18 174 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 ZNF486Q96H40 463 aaPredicted RBP6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 DCUN1D5Q9BTE7 237 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 ESM1Q9NQ30 184 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 TAS2R8Q9NYW2 309 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 ITGB1BP2Q9UKP3 347 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 TRAPPC2LQ9UL33 140 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 HSPB6O14558 160 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 RNASE1P07998 156 aaKnown RBP6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 CSF1P09603 554 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 PPP5CP53041 499 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 EDDM3BP56851 147 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 BAK1Q16611 211 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 POU2AF1Q16633 256 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 ZNF645Q8N7E2 425 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 H1FXQ92522 213 aaKnown RBP6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 C7orf50Q9BRJ6 194 aaKnown RBP6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 ABHD14AQ9BUJ0 271 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 NECAP2Q9NVZ3 263 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 ONECUT1Q9UBC0 465 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 KLK11Q9UBX7 282 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 AMMECR1Q9Y4X0 333 aaPredicted RBP6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 SMAD7O15105 426 aaKnown RBP6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 GNG2P59768 71 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 SCN1BQ07699 218 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 C16orf82Q7Z2V1 217 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 OR13C8Q8NGS7 320 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 RNF5Q99942 180 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 SUCNR1Q9BXA5 334 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 C16orf95Q9H693 158 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 ZNF221Q9UK13 617 aa6.66□□□□□ -1.34
CDC42SE2-208ENST00000505065 IGKV1D-13A0A0B4J2D9 117 aa6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 SLC22A5O76082 557 aa6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 IGKV1-13P0DP09 117 aa6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 IFITM3Q01628 133 aa6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 TAGLNQ01995 201 aaKnown RBP6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 FCAMRQ8WWV6 532 aa6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 GCDHQ92947 438 aaPredicted RBP6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 NABP2Q9BQ15 211 aa6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 TBC1D24Q9ULP9 559 aa6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 A0A1W2PQ09 198 aa6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 ZNF736B4DX44 427 aaPredicted RBP6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 PLA2G10O15496 165 aa6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 CD1BP29016 333 aa6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 COMPP49747 757 aaPredicted RBP6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 TAS2R19P59542 299 aa6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 BCL6BQ8N143 479 aaPredicted RBP6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 DIRAS2Q96HU8 199 aa6.65□□□□□ -1.34
CDC42SE2-208ENST00000505065 SAA2-SAA4A0A096LPE2 208 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 TRAV39A0A0B4J263 110 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 TRAV40A0A0B4J280 105 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 A0A0U1RQK1 487 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 RGS11O94810 467 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 BRI3O95415 125 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 IGLV2-23P01705 113 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 SAA2P0DJI9 122 aaPredicted RBP6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 CT45A6P0DMU7 189 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 CT45A5P0DMU8 189 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 CT45A7P0DMV0 189 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 PRRX1P54821 245 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 PNKDQ8N490 385 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 LHX4Q969G2 390 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 AKR1E2Q96JD6 320 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 RDH8Q9NYR8 311 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 KCNIP1Q9NZI2 227 aa6.65□□□□□ -1.35
CDC42SE2-208ENST00000505065 FABP12A6NFH5 140 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 INAFM1C9JVW0 142 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 RBFOX2O43251 390 aaKnown RBP eCLIP6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 AMY1AP04745 511 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 AMY2AP04746 511 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 ECI1P42126 302 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 DLX1P56177 255 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 ASAH1Q13510 395 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 PDLIM3Q53GG5 364 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms