RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PP6455Q8WZ26 134 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 SPTSSAQ969W0 71 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 WNT10AQ9GZT5 417 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 CRIM1Q9NZV1 1036 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 CLN8Q9UBY8 286 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 LTBP2Q14767 1821 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 IGKV3D-11A0A0A0MRZ8 115 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 B4DEV8 164 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 PIAS2O75928 621 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 NDUFB4O95168 129 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 ZNF32P17041 273 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 IL3RAP26951 378 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 LTBRP36941 435 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 PSMB3P49720 205 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 CCR5P51681 352 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 RND2P52198 227 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 ZP4Q12836 540 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 C20orf204Q6ZNR8 217 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 BAGE3Q86Y29 109 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 BAGE2Q86Y30 109 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 H1FOOQ8IZA3 346 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-208ENST00000504387 ZNF114Q8NC26 417 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 CADM4Q8NFZ8 388 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 SGMS2Q8NHU3 365 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 ZNF501Q96CX3 271 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-208ENST00000504387 OXGR1Q96P68 337 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 ZDHHC11Q9H8X9 412 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 GPR27Q9NS67 375 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 CISD1Q9NZ45 108 aaKnown RBP6.51□□□□□ -1.37
NEDD9-208ENST00000504387 OR1A1Q9P1Q5 309 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 PTRH2Q9Y3E5 179 aaKnown RBP6.51□□□□□ -1.37
NEDD9-208ENST00000504387 TRAV38-1A0A0B4J264 116 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 A0A1W2PQD3 144 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 BLACEA4D250 179 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 RRP8O43159 456 aaKnown RBP6.51□□□□□ -1.37
NEDD9-208ENST00000504387 DHHO43323 396 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 ZFAND5O76080 213 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 NAPSAO96009 420 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 ID3Q02535 119 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 PNRC1Q12796 327 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-208ENST00000504387 ANKRD37Q7Z713 158 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 HAPLN4Q86UW8 402 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 ADPRHL1Q8NDY3 354 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 BEND2Q8NDZ0 799 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 OR2V1Q8NHB1 315 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 SSC4DQ8WTU2 575 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 ST8SIA1Q92185 356 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 SMDT1Q9H4I9 107 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 ZNF703Q9H7S9 590 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-208ENST00000504387 TP73-AS1Q9UF72 201 aa6.51□□□□□ -1.37
NEDD9-208ENST00000504387 PI4KAP42356 2102 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 A0A1B0GW64 132 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 PGLYRP1O75594 196 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-208ENST00000504387 HRASP01112 189 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 IGHV3-13P01766 116 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 IGHV3-7P01780 117 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 PMCHP20382 165 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 OTX2P32243 289 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 ADMP35318 185 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 ATP5G3P48201 142 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 ARF1P84077 181 aaKnown RBP6.5□□□□□ -1.37
NEDD9-208ENST00000504387 RELQ04864 619 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-208ENST00000504387 TFF3Q07654 80 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 ZNF816Q0VGE8 651 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-208ENST00000504387 LTC4SQ16873 150 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 ACSM6Q6P461 480 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 WDR5BQ86VZ2 330 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 SLC25A45Q8N413 288 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 CMTM2Q8TAZ6 248 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 RNASE8Q8TDE3 154 aaKnown RBP6.5□□□□□ -1.37
NEDD9-208ENST00000504387 OR2J1Q9GZK6 312 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 ARFGEF3Q5TH69 2177 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 TPRP12270 2363 aaKnown RBP6.5□□□□□ -1.37
NEDD9-208ENST00000504387 EP300Q09472 2414 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-208ENST00000504387 IGKV1-6A0A0C4DH72 117 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 CLEC18AA5D8T8 446 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 LILRA5A6NI73 299 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 SH2D1BO14796 132 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 SYNGR2O43760 224 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 NTF3P20783 257 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 DTYMKP23919 212 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 HINT1P49773 126 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-208ENST00000504387 PTTG1IPP53801 180 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 TCL1AP56279 114 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 EDDM3BP56851 147 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 IL24Q13007 206 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 RAB30Q15771 203 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 MRGPRGQ86SM5 289 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 GBGT1Q8N5D6 347 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 CLEC18CQ8NCF0 446 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 OR5L2Q8NGL0 311 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 OR10G4Q8NGN3 311 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 OR10G9Q8NGN4 311 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 OR10G7Q8NGN6 311 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 OR1L6Q8NGR2 347 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 TMEM170AQ8WVE7 144 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 TXN2Q99757 166 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 VAMP8Q9BV40 100 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 ANGPTL4Q9BY76 406 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 FAM234AQ9H0X4 552 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms