RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 SCAMP4Q969E2 229 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 CLDN23Q96B33 292 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 SIGLEC12Q96PQ1 595 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 MRPS17Q9Y2R5 130 aaKnown RBP5.43□□□□□ -1.54
CLCN3-204ENST00000504131 MYH4Q9Y623 1939 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 SDCBPO00560 298 aaPredicted RBP5.43□□□□□ -1.54
CLCN3-204ENST00000504131 RPS14P62263 151 aaKnown RBP5.43□□□□□ -1.54
CLCN3-204ENST00000504131 ZNF85Q03923 595 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 ARFRP1Q13795 201 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 PRSS36Q5K4E3 855 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 FAM19A5Q7Z5A7 132 aaPredicted RBP5.43□□□□□ -1.54
CLCN3-204ENST00000504131 PTPMT1Q8WUK0 201 aaPredicted RBP5.43□□□□□ -1.54
CLCN3-204ENST00000504131 KCNS1Q96KK3 526 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 RCHY1Q96PM5 261 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 RNASE7Q9H1E1 156 aaKnown RBP5.43□□□□□ -1.54
CLCN3-204ENST00000504131 SMDT1Q9H4I9 107 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 KIAA1217Q5T5P2 1943 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 C4AP0C0L4 1744 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 C4BP0C0L5 1744 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 EWSR1Q01844 656 aaKnown RBP eCLIP5.43□□□□□ -1.54
CLCN3-204ENST00000504131 ACTL10Q5JWF8 245 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 LY6G6FQ5SQ64 297 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 RNF152Q8N8N0 203 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 TSACCQ96A04 125 aaPredicted RBP5.43□□□□□ -1.54
CLCN3-204ENST00000504131 SPANXDQ9BXN6 97 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 IL36GQ9NZH8 169 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 PRSS50Q9UI38 385 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 IER3IP1Q9Y5U9 82 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 PRSS21Q9Y6M0 314 aa5.43□□□□□ -1.54
CLCN3-204ENST00000504131 FAM236DA0A1B0GTK5 79 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 NPIPB11E5RHQ5 1161 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 F8W1H4 67 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 FAM236CP0DP71 79 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 COL8A1P27658 744 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 SRIP30626 198 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 PTGDSP41222 190 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 NKX2-1P43699 371 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-204ENST00000504131 NMUP48645 174 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 SRSF3P84103 164 aaKnown RBP5.42□□□□□ -1.54
CLCN3-204ENST00000504131 GTSCR1Q86UQ5 136 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 ADAD2Q8NCV1 583 aaKnown RBP5.42□□□□□ -1.54
CLCN3-204ENST00000504131 TMEM174Q8WUU8 243 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 KLK6Q92876 244 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 SIGLEC7Q9Y286 467 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 INSL5Q9Y5Q6 135 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 LY75O60449 1722 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 TRAV9-2A0A087WT02 112 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 A0A1B0GUS0 222 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 TMEM250H0YL14 139 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 RAMP1O60894 148 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 IGHA1P01876 353 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 MALP21145 153 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 CEACAM16Q2WEN9 425 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 OR4C11Q6IEV9 310 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 IL17RELQ6ZVW7 336 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 OR4X2Q8NGF9 303 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 OR1F12Q8NHA8 337 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 SGMS2Q8NHU3 365 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 FAM110DQ8TAY7 271 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-204ENST00000504131 NDUFB11Q9NX14 153 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 WSB2Q9NYS7 404 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-204ENST00000504131 A0A087WWC5 75 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 TMSB15BA0A087X1C1 80 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 SLC17A2O00624 439 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 WNT1P04628 370 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 PRDX3P30048 256 aaKnown RBP5.42□□□□□ -1.54
CLCN3-204ENST00000504131 ECSCRQ19T08 205 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 CXorf67Q86X51 503 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-204ENST00000504131 GPR21Q99679 349 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 GDF15Q99988 308 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 NXT2Q9NPJ8 142 aaKnown RBP5.42□□□□□ -1.54
CLCN3-204ENST00000504131 SLC25A37Q9NYZ2 338 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 COL1A2P08123 1366 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 TRAV2A0A0B4J234 112 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 TRAV13-1A0A0B4J241 112 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 A0A1B0GW64 132 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 FAM159BA6NKW6 160 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 H0YL77 283 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 GYPAP02724 150 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 LINC00694P0DN24 101 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 SLC25A6P12236 298 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 EGR1P18146 543 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 PCBD1P61457 104 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 ERVK-16P61578 105 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 TXNRD3NBQ6F5E7 133 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 SCGB1D4Q6XE38 83 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 BHLHA9Q7RTU4 235 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 OR5AK2Q8NH90 309 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 FGF11Q92914 225 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 GPR146Q96CH1 333 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 SLC25A44Q96H78 314 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-204ENST00000504131 RTP3Q9BQQ7 232 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 BARX1Q9HBU1 254 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-204ENST00000504131 APOBEC3GQ9HC16 384 aaKnown RBP5.42□□□□□ -1.54
CLCN3-204ENST00000504131 KIR2DL5BA0A0G2JN68 375 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 KIR2DL5BA0A0G2JPC4 375 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 MBD3L4A6NDZ8 208 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-204ENST00000504131 MBD3L3A6NE82 208 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-204ENST00000504131 MBD3L5A6NJ08 208 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-204ENST00000504131 IFNL4K9M1U5 179 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms