RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 BPTFQ12830 3046 aa5.12□□□□□ -1.59
LINC01340-201ENST00000504012 TRIP12Q14669 1992 aaPredicted RBP5.11□□□□□ -1.59
LINC01340-201ENST00000504012 IGLV1-36A0A0B4J1U3 117 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 CTXND1A0A1B0GTU2 59 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 A0A1W2PPV9 198 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 C9orf118A6NHY6 69 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 GRXCR1A8MXD5 290 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 SDCBPO00560 298 aaPredicted RBP5.11□□□□□ -1.59
LINC01340-201ENST00000504012 CRXO43186 299 aaPredicted RBP5.11□□□□□ -1.59
LINC01340-201ENST00000504012 NUDT3O95989 172 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 CA2P00918 260 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 HLA-DQA2P01906 255 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 FTH1P19P0C7X4 201 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 STAG3L2P0CL84 134 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 CCL2P13500 99 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 AREGP15514 252 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 CD33P20138 364 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 AMTP48728 403 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 RRADP55042 308 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 GFRA1P56159 465 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 MPV17L2Q567V2 206 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 PRAMEF5Q5TYX0 476 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 PRAMEF6Q5VXH4 476 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 CARD17Q5XLA6 110 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 SLC25A34Q6PIV7 304 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 RASL11AQ6T310 242 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 GLIPR1L1Q6UWM5 242 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 LCN15Q6UWW0 184 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 Q6ZSR6 202 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 Q6ZVH6 145 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 HSD11B1LQ7Z5J1 315 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 S100A7AQ86SG5 101 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 LILRA3Q8N6C8 439 aaPredicted RBP5.11□□□□□ -1.59
LINC01340-201ENST00000504012 C18orf32Q8TCD1 76 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 RLN3Q8WXF3 142 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 KLHDC7BQ96G42 594 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 RAX2Q96IS3 184 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 ARHGAP5-AS1Q96IT6 56 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 TSSK2Q96PF2 358 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 GPER1Q99527 375 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 TMEM204Q9BSN7 226 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 NPFFR1Q9GZQ6 430 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 TMEM222Q9H0R3 208 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 ZNF286AQ9HBT8 521 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 HES4Q9HCC6 221 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 JKAMPQ9P055 326 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 TAC3Q9UHF0 121 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 JPT1Q9UK76 154 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 PILRBQ9UKJ0 227 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 HCFC2Q9Y5Z7 792 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 COL4A2P08572 1712 aa5.11□□□□□ -1.59
LINC01340-201ENST00000504012 IGKV1D-42A0A075B6H8 117 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 TRAV8-6A0A0B4J262 113 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 TRAV38-1A0A0B4J264 116 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 MDFIC2A0A1B0GVS7 189 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 A0A1W2PP55 124 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 ODAMA1E959 279 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 LINC01553A4QN01 128 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 GAGE12HA6NDE8 117 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 ZNF840PA6NDX5 716 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 K7EQS6 105 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 SLC17A3O00476 420 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 SH2D1BO14796 132 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 GJB5O95377 273 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 MPIG6BO95866 241 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 IGHG4P01861 327 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 IGHMP01871 453 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 HBZP02008 142 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 C8orf89P0DMQ9 161 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 CPMP14384 443 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 IGLL1P15814 213 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 VDAC1P21796 283 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 GNG4P50150 75 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 PAX9P55771 341 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 LGALS4P56470 323 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 CLDN2P57739 230 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 PLP1P60201 277 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 HBG1P69891 147 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 HBG2P69892 147 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 MRPS6P82932 125 aaKnown RBP5.1□□□□□ -1.59
LINC01340-201ENST00000504012 POU3F1Q03052 451 aaPredicted RBP5.1□□□□□ -1.59
LINC01340-201ENST00000504012 OR8B8Q15620 311 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 TRIP6Q15654 476 aaKnown RBP5.1□□□□□ -1.59
LINC01340-201ENST00000504012 SRSF7Q16629 238 aaKnown RBP eCLIP5.1□□□□□ -1.59
LINC01340-201ENST00000504012 ZNF324BQ6AW86 544 aaPredicted RBP5.1□□□□□ -1.59
LINC01340-201ENST00000504012 WBP2NLQ6ICG8 309 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 SLC25A47Q6Q0C1 308 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 Q6ZVL8 140 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 ATG4DQ86TL0 474 aaPredicted RBP5.1□□□□□ -1.59
LINC01340-201ENST00000504012 ZNF525Q8N782 197 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 OR2K2Q8NGT1 345 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 NT5CQ8TCD5 201 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 DAZLQ92904 295 aaKnown RBP5.1□□□□□ -1.59
LINC01340-201ENST00000504012 SCAMP4Q969E2 229 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 C5orf30Q96GV9 206 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 AP1S3Q96PC3 154 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 CHRDL1Q9BU40 450 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 CLEC7AQ9BXN2 247 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 GEMIN7Q9H840 131 aaKnown RBP5.1□□□□□ -1.59
LINC01340-201ENST00000504012 GNB4Q9HAV0 340 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms