RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 MAP1LC3BQ9GZQ8 125 aa12.68□□□□□ -0.38
SNF8-203ENST00000504000 OR1A1Q9P1Q5 309 aa12.68□□□□□ -0.38
SNF8-203ENST00000504000 TDGF1P13385 188 aa12.68□□□□□ -0.38
SNF8-203ENST00000504000 WNT5AP41221 380 aa12.68□□□□□ -0.38
SNF8-203ENST00000504000 FOXG1P55316 489 aaPredicted RBP12.68□□□□□ -0.38
SNF8-203ENST00000504000 COA6Q5JTJ3 125 aaKnown RBP12.68□□□□□ -0.38
SNF8-203ENST00000504000 SPINK14Q6IE38 97 aa12.68□□□□□ -0.38
SNF8-203ENST00000504000 SSX7Q7RTT5 188 aa12.68□□□□□ -0.38
SNF8-203ENST00000504000 OR10A7Q8NGE5 316 aa12.68□□□□□ -0.38
SNF8-203ENST00000504000 RNASEH2CQ8TDP1 164 aaKnown RBP12.68□□□□□ -0.38
SNF8-203ENST00000504000 CT55Q8WUE5 264 aa12.68□□□□□ -0.38
SNF8-203ENST00000504000 ZNF488Q96MN9 340 aa12.68□□□□□ -0.38
SNF8-203ENST00000504000 GP6Q9HCN6 339 aa12.68□□□□□ -0.38
SNF8-203ENST00000504000 HSPB7Q9UBY9 170 aa12.68□□□□□ -0.38
SNF8-203ENST00000504000 PRUNE2Q8WUY3 3088 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 WDR87Q6ZQQ6 2873 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 TRBV23-1A0A0A0MS06 115 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 ZNF737O75373 536 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 KBTBD11O94819 623 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 IFNA10P01566 189 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 PFN1P07737 140 aaKnown RBP12.67□□□□□ -0.38
SNF8-203ENST00000504000 IAPPP10997 89 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 DEFA6Q01524 100 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 MEF2BQ02080 365 aaPredicted RBP12.67□□□□□ -0.38
SNF8-203ENST00000504000 ZNF146Q15072 292 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 TMEM241Q24JQ0 296 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 C9orf135Q5VTT2 229 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 UBALD2Q8IYN6 164 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 FGFRL1Q8N441 504 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 IL1F10Q8WWZ1 152 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 RTL8AQ9BWD3 113 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 SLC39A9Q9NUM3 307 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 POLDIP2Q9Y2S7 368 aa12.67□□□□□ -0.38
SNF8-203ENST00000504000 CEBPZOSA8MTT3 80 aa12.66□□□□□ -0.38
SNF8-203ENST00000504000 TNFRSF9Q07011 255 aa12.66□□□□□ -0.38
SNF8-203ENST00000504000 SLC38A11Q08AI6 406 aa12.66□□□□□ -0.38
SNF8-203ENST00000504000 CLN3Q13286 438 aa12.66□□□□□ -0.38
SNF8-203ENST00000504000 IZUMO4Q1ZYL8 232 aa12.66□□□□□ -0.38
SNF8-203ENST00000504000 C17orf78Q8N4C9 275 aa12.66□□□□□ -0.38
SNF8-203ENST00000504000 RPP25LQ8N5L8 163 aaKnown RBP12.66□□□□□ -0.38
SNF8-203ENST00000504000 TCTEX1D1Q8N7M0 179 aa12.66□□□□□ -0.38
SNF8-203ENST00000504000 OR5R1Q8NH85 324 aa12.66□□□□□ -0.38
SNF8-203ENST00000504000 NANOS1Q8WY41 292 aaKnown RBP12.66□□□□□ -0.38
SNF8-203ENST00000504000 MRPL37Q9BZE1 423 aaKnown RBP12.66□□□□□ -0.38
SNF8-203ENST00000504000 RBKSQ9H477 322 aa12.66□□□□□ -0.38
SNF8-203ENST00000504000 PPP1R3CQ9UQK1 317 aa12.66□□□□□ -0.38
SNF8-203ENST00000504000 KMT2EQ8IZD2 1858 aa12.66□□□□□ -0.38
SNF8-203ENST00000504000 LILRA1O75019 489 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 P0C879 139 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 PAX1P15863 534 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 ACP1P24666 158 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 PKIAP61925 76 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 SRYQ05066 204 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 NCR3LG1Q68D85 454 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 TIPARPQ7Z3E1 657 aaKnown RBP12.65□□□□□ -0.38
SNF8-203ENST00000504000 TMEM183AQ8IXX5 376 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 DRAM1Q8N682 238 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 LHX4Q969G2 390 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 SPRY4Q9C004 299 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 MANBALQ9NQG1 85 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 TRAPPC2LQ9UL33 140 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 CTXND1A0A1B0GTU2 59 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 DVL1O14640 695 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 ATXN7O15265 892 aaPredicted RBP12.65□□□□□ -0.38
SNF8-203ENST00000504000 RHBDL1O75783 438 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 OR2H2O95918 312 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 GPX4P36969 197 aaPredicted RBP12.65□□□□□ -0.38
SNF8-203ENST00000504000 FGF8P55075 233 aaPredicted RBP12.65□□□□□ -0.38
SNF8-203ENST00000504000 SPANXN5Q5MJ07 72 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 GFI1BQ5VTD9 330 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 THOC3Q96J01 351 aaKnown RBP12.65□□□□□ -0.38
SNF8-203ENST00000504000 SMIM7Q9BQ49 75 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 ABI3Q9P2A4 366 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 PRSS50Q9UI38 385 aa12.65□□□□□ -0.38
SNF8-203ENST00000504000 RBM7Q9Y580 266 aaKnown RBP12.65□□□□□ -0.38
SNF8-203ENST00000504000 A0A1W2PR80 420 aa12.64□□□□□ -0.39
SNF8-203ENST00000504000 ARGFXA6NJG6 315 aa12.64□□□□□ -0.39
SNF8-203ENST00000504000 PGA5P0DJD9 388 aa12.64□□□□□ -0.39
SNF8-203ENST00000504000 CA6P23280 308 aa12.64□□□□□ -0.39
SNF8-203ENST00000504000 PSMB3P49720 205 aa12.64□□□□□ -0.39
SNF8-203ENST00000504000 C9orf152Q5JTZ5 239 aa12.64□□□□□ -0.39
SNF8-203ENST00000504000 ABHD17BQ5VST6 288 aa12.64□□□□□ -0.39
SNF8-203ENST00000504000 ZNF600Q6ZNG1 722 aa12.64□□□□□ -0.39
SNF8-203ENST00000504000 ZNF645Q8N7E2 425 aa12.64□□□□□ -0.39
SNF8-203ENST00000504000 OR1K1Q8NGR3 316 aa12.64□□□□□ -0.39
SNF8-203ENST00000504000 BCL2L2Q92843 193 aaPredicted RBP12.64□□□□□ -0.39
SNF8-203ENST00000504000 PACRGQ96M98 296 aaPredicted RBP12.64□□□□□ -0.39
SNF8-203ENST00000504000 HIST1H2BLQ99880 126 aa12.64□□□□□ -0.39
SNF8-203ENST00000504000 TMEM147Q9BVK8 224 aa12.64□□□□□ -0.39
SNF8-203ENST00000504000 TTTY12Q9BZ98 90 aa12.64□□□□□ -0.39
SNF8-203ENST00000504000 PCSK5Q92824 1860 aa12.64□□□□□ -0.39
SNF8-203ENST00000504000 SH2D1BO14796 132 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 WDR1O75083 606 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 CELA3AP09093 270 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 FABP4P15090 132 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 CEACAM6P40199 344 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 EIF4EBP1Q13541 118 aaPredicted RBP12.63□□□□□ -0.39
SNF8-203ENST00000504000 BSXQ3C1V8 233 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 OR51G1Q8NGK1 321 aa12.63□□□□□ -0.39
SNF8-203ENST00000504000 OR4X1Q8NH49 305 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms