RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 POC5Q8NA72 575 aa11.93□□□□□ -0.5
PDLIM7-210ENST00000503827 OR4K15Q8NH41 348 aa11.93□□□□□ -0.5
PDLIM7-210ENST00000503827 MRPS24Q96EL2 167 aaKnown RBP11.93□□□□□ -0.5
PDLIM7-210ENST00000503827 NRBF2Q96F24 287 aa11.93□□□□□ -0.5
PDLIM7-210ENST00000503827 CLCC1Q96S66 551 aa11.93□□□□□ -0.5
PDLIM7-210ENST00000503827 METTL9Q9H1A3 318 aa11.93□□□□□ -0.5
PDLIM7-210ENST00000503827 PEF1Q9UBV8 284 aaKnown RBP11.93□□□□□ -0.5
PDLIM7-210ENST00000503827 ADAM30Q9UKF2 790 aa11.93□□□□□ -0.5
PDLIM7-210ENST00000503827 ING4Q9UNL4 249 aa11.93□□□□□ -0.5
PDLIM7-210ENST00000503827 A0A0J9YWU9 116 aa11.92□□□□□ -0.5
PDLIM7-210ENST00000503827 OR4C45A6NMZ5 311 aa11.92□□□□□ -0.5
PDLIM7-210ENST00000503827 OR2A4O95047 310 aa11.92□□□□□ -0.5
PDLIM7-210ENST00000503827 NDUFB8O95169 186 aa11.92□□□□□ -0.5
PDLIM7-210ENST00000503827 CDRT1O95170 752 aa11.92□□□□□ -0.5
PDLIM7-210ENST00000503827 RPSAP08865 295 aaKnown RBP11.92□□□□□ -0.5
PDLIM7-210ENST00000503827 RAB3AP20336 220 aa11.92□□□□□ -0.5
PDLIM7-210ENST00000503827 ADARB1P78563 741 aaKnown RBP11.92□□□□□ -0.5
PDLIM7-210ENST00000503827 TMED1Q13445 227 aa11.92□□□□□ -0.5
PDLIM7-210ENST00000503827 ALKBH1Q13686 389 aaKnown RBP11.92□□□□□ -0.5
PDLIM7-210ENST00000503827 CD300EQ496F6 205 aaPredicted RBP11.92□□□□□ -0.5
PDLIM7-210ENST00000503827 FAM131AQ6UXB0 335 aa11.92□□□□□ -0.5
PDLIM7-210ENST00000503827 IL36GQ9NZH8 169 aa11.92□□□□□ -0.5
PDLIM7-210ENST00000503827 MUC4Q99102 2169 aa11.92□□□□□ -0.5
PDLIM7-210ENST00000503827 ZNF785A8K8V0 405 aa11.91□□□□□ -0.5
PDLIM7-210ENST00000503827 B2RBV5 119 aa11.91□□□□□ -0.5
PDLIM7-210ENST00000503827 MCRIP1C9JLW8 97 aa11.91□□□□□ -0.5
PDLIM7-210ENST00000503827 SLC16A6O15403 523 aa11.91□□□□□ -0.5
PDLIM7-210ENST00000503827 AIREO43918 545 aa11.91□□□□□ -0.5
PDLIM7-210ENST00000503827 SNX3O60493 162 aa11.91□□□□□ -0.5
PDLIM7-210ENST00000503827 GSTP1P09211 210 aaKnown RBP11.91□□□□□ -0.5
PDLIM7-210ENST00000503827 SNRPBP14678 240 aaKnown RBP11.91□□□□□ -0.5
PDLIM7-210ENST00000503827 AADACP22760 399 aa11.91□□□□□ -0.5
PDLIM7-210ENST00000503827 EPHA2P29317 976 aa11.91□□□□□ -0.5
PDLIM7-210ENST00000503827 OR3A3P47888 321 aa11.91□□□□□ -0.5
PDLIM7-210ENST00000503827 DYRK1AQ13627 763 aa11.91□□□□□ -0.5
PDLIM7-210ENST00000503827 CCDC124Q96CT7 223 aaKnown RBP11.91□□□□□ -0.5
PDLIM7-210ENST00000503827 S100A13Q99584 98 aa11.91□□□□□ -0.5
PDLIM7-210ENST00000503827 FAM107BQ9H098 131 aa11.91□□□□□ -0.5
PDLIM7-210ENST00000503827 SAA2-SAA4A0A096LPE2 208 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 DAPL1A0PJW8 107 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 AQP12BA6NM10 295 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 MITFO75030 526 aaPredicted RBP11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 FADS2O95864 444 aaKnown RBP11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 CA2P00918 260 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 SAA2P0DJI9 122 aaPredicted RBP11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 SERPINA2P20848 420 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 ALDH3A2P51648 485 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 EWSR1Q01844 656 aaKnown RBP eCLIP11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 TNFRSF9Q07011 255 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 GNMTQ14749 295 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 GUCA2BQ16661 112 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 AQP12AQ8IXF9 295 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 OR5T1Q8NG75 326 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 OR52L2PQ8NGH6 319 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 DYNLRB2Q8TF09 96 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 TSEN15Q8WW01 171 aaKnown RBP11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 RFKQ969G6 155 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 TAF9BQ9HBM6 251 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 SPACA1Q9HBV2 294 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 PAK1IP1Q9NWT1 392 aaPredicted RBP11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 RCC2Q9P258 522 aaKnown RBP11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 METTL1Q9UBP6 276 aaKnown RBP11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 JPT1Q9UK76 154 aa11.9□□□□□ -0.5
PDLIM7-210ENST00000503827 J3QLW9 94 aa11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 SLC22A1O15245 554 aa11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 RBBP9O75884 186 aa11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 MED14OSP0DP75 135 aa11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 ZNF19P17023 458 aa11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 RCC1P18754 421 aaPredicted RBP11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 MC5RP33032 325 aa11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 PPP1CCP36873 323 aaKnown RBP11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 FAM71F2Q6NXP2 309 aa11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 ZNF343Q6P1L6 599 aa11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 LYG2Q86SG7 212 aa11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 OR51A2Q8NGJ7 313 aa11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 PELI1Q96FA3 418 aa11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 GGTLC1Q9BX51 225 aa11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 JAM3Q9BX67 310 aa11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 KCNIP1Q9NZI2 227 aa11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 ENOPH1Q9UHY7 261 aa11.89□□□□□ -0.51
PDLIM7-210ENST00000503827 LOC102724200A0A096LPH7 203 aaPredicted RBP11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 A0A0B4J203 849 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 OR5H14A6NHG9 310 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 H7C2Y5 167 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 YPEL1O60688 119 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 ZNF780AO75290 641 aaPredicted RBP11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 FKBP6O75344 327 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 TRBV12-3P01733 135 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 ZNF529Q6P280 563 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 SLC16A13Q7RTY0 426 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 WFDC3Q8IUB2 231 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 BVESQ8NE79 360 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 GRPEL2Q8TAA5 225 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 GHSRQ92847 366 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 SNAPC3Q92966 411 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 C4orf36Q96KX1 117 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 YPEL2Q96QA6 119 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 RNF5Q99942 180 aa11.88□□□□□ -0.51
PDLIM7-210ENST00000503827 TMEM212A6NML5 194 aa11.87□□□□□ -0.51
PDLIM7-210ENST00000503827 GTF2F2P13984 249 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms