RNA–Protein interactions for RNA: ENST00000501412.2

RAP1B-213, Transcript of RAP1B, member of RAS oncogene family, human

TSL 2

Gene RAP1B, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-213	ENST00000501412	C20orf85	Q9H1P6	137 aa		18.19	■□□□□ 0.5
RAP1B-213	ENST00000501412	UNKL	Q9H9P5	680 aa	Known RBP	18.19	■□□□□ 0.5
RAP1B-213	ENST00000501412	NUDT15	Q9NV35	164 aa		18.19	■□□□□ 0.5
RAP1B-213	ENST00000501412	GPR132	Q9UNW8	380 aa		18.19	■□□□□ 0.5
RAP1B-213	ENST00000501412	FLVCR2	Q9UPI3	526 aa		18.19	■□□□□ 0.5
RAP1B-213	ENST00000501412	INSIG2	Q9Y5U4	225 aa		18.19	■□□□□ 0.5
RAP1B-213	ENST00000501412	NUBP2	Q9Y5Y2	271 aa		18.19	■□□□□ 0.5
RAP1B-213	ENST00000501412	KPTN	Q9Y664	436 aa		18.19	■□□□□ 0.5
RAP1B-213	ENST00000501412	ITPR3	Q14573	2671 aa		18.18	■□□□□ 0.5
RAP1B-213	ENST00000501412	FAM172BP	A6NC97	362 aa		18.18	■□□□□ 0.5
RAP1B-213	ENST00000501412		B4DSR2	109 aa		18.18	■□□□□ 0.5
RAP1B-213	ENST00000501412	MSMB	P08118	114 aa		18.18	■□□□□ 0.5
RAP1B-213	ENST00000501412	MMP9	P14780	707 aa		18.18	■□□□□ 0.5
RAP1B-213	ENST00000501412	CD34	P28906	385 aa		18.18	■□□□□ 0.5
RAP1B-213	ENST00000501412	DLX1	P56177	255 aa		18.18	■□□□□ 0.5
RAP1B-213	ENST00000501412	FXYD4	P59646	89 aa		18.18	■□□□□ 0.5
RAP1B-213	ENST00000501412	HERV-K104	P61576	105 aa		18.18	■□□□□ 0.5
RAP1B-213	ENST00000501412	SURF2	Q15527	256 aa	Predicted RBP	18.18	■□□□□ 0.5
RAP1B-213	ENST00000501412		Q3ZCU0	254 aa		18.18	■□□□□ 0.5
RAP1B-213	ENST00000501412	ZDHHC22	Q8N966	263 aa		18.18	■□□□□ 0.5
RAP1B-213	ENST00000501412	MARVELD1	Q9BSK0	173 aa		18.18	■□□□□ 0.5
RAP1B-213	ENST00000501412	ITGB1BP2	Q9UKP3	347 aa		18.18	■□□□□ 0.5
RAP1B-213	ENST00000501412	CELSR1	Q9NYQ6	3014 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	SLC31A2	O15432	143 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	RGS11	O94810	467 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	IGHV3-7	P01780	117 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	ECI1	P42126	302 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	DVL1P1	P54792	670 aa	Predicted RBP	18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	PAX8	Q06710	450 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	CT45A1	Q5HYN5	189 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	PLET1	Q6UQ28	207 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	CT45A3	Q8NHU0	189 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	FAM216A	Q8WUB2	273 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	TNFRSF14	Q92956	283 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	SUCNR1	Q9BXA5	334 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	TMEM133	Q9H2Q1	129 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	C5orf66	Q9H5L9	145 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	PSG11	Q9UQ72	335 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	WNK2	Q9Y3S1	2297 aa		18.17	■□□□□ 0.5
RAP1B-213	ENST00000501412	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	18.16	■□□□□ 0.5	3e-7	■■□□□ 12.1
RAP1B-213	ENST00000501412	IGLV2-14	P01704	120 aa		18.16	■□□□□ 0.5
RAP1B-213	ENST00000501412	PRTN3	P24158	256 aa		18.16	■□□□□ 0.5
RAP1B-213	ENST00000501412	GNRHR	P30968	328 aa		18.16	■□□□□ 0.5
RAP1B-213	ENST00000501412	BAMBI	Q13145	260 aa		18.16	■□□□□ 0.5
RAP1B-213	ENST00000501412	C8orf31	Q8N9H6	132 aa		18.16	■□□□□ 0.5
RAP1B-213	ENST00000501412	ZNF596	Q8TC21	504 aa		18.16	■□□□□ 0.5
RAP1B-213	ENST00000501412	EDARADD	Q8WWZ3	215 aa		18.16	■□□□□ 0.5
RAP1B-213	ENST00000501412	TOMM40L	Q969M1	308 aa		18.16	■□□□□ 0.5
RAP1B-213	ENST00000501412	CREB3L1	Q96BA8	519 aa		18.16	■□□□□ 0.5
RAP1B-213	ENST00000501412	RTBDN	Q9BSG5	229 aa	Predicted RBP	18.16	■□□□□ 0.5
RAP1B-213	ENST00000501412	RSRP1	Q9BUV0	290 aa		18.16	■□□□□ 0.5
RAP1B-213	ENST00000501412	METTL8	Q9H825	291 aa	Known RBP	18.16	■□□□□ 0.5
RAP1B-213	ENST00000501412	TRAV6	A0A075B6T7	132 aa		18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412	hCG_1809904	A0A1W2PP81	198 aa		18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412		A0A1W2PPE2	198 aa		18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412		A0A1W2PR64	198 aa		18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412		A0A1W2PRV1	198 aa		18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412	ARPC1B	O15143	372 aa	Known RBP	18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412	OR8U9	P0C7N5	309 aa		18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412	IGHV4-31	P0DP07	118 aa		18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412	MECP2	P51608	486 aa	Known RBP	18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412	LUM	P51884	338 aa	Predicted RBP	18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412	TMEM249	Q2WGJ8	235 aa		18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412	HCP5	Q6MZN7	132 aa		18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412	BTNL3	Q6UXE8	466 aa		18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412	SLC25A48	Q6ZT89	311 aa	Known RBP	18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412	LINC01356	Q8N9X3	169 aa		18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412	OR8U1	Q8NH10	309 aa		18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412	IFI27L2	Q9H2X8	130 aa		18.15	■□□□□ 0.5
RAP1B-213	ENST00000501412	ST8SIA5	O15466	376 aa		18.14	■□□□□ 0.5
RAP1B-213	ENST00000501412	CIART	Q8N365	385 aa	Predicted RBP	18.14	■□□□□ 0.5
RAP1B-213	ENST00000501412	OR2AK2	Q8NG84	335 aa		18.14	■□□□□ 0.5
RAP1B-213	ENST00000501412	SECTM1	Q8WVN6	248 aa		18.14	■□□□□ 0.5
RAP1B-213	ENST00000501412	MSI2	Q96DH6	328 aa	Known RBP	18.14	■□□□□ 0.5
RAP1B-213	ENST00000501412	C5orf30	Q96GV9	206 aa		18.14	■□□□□ 0.5
RAP1B-213	ENST00000501412	ABHD14A	Q9BUJ0	271 aa		18.14	■□□□□ 0.5
RAP1B-213	ENST00000501412	SLC5A7	Q9GZV3	580 aa		18.14	■□□□□ 0.5
RAP1B-213	ENST00000501412	IGHV2-26	A0A0B4J1V2	119 aa		18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412		A0A1W2PPE3	182 aa		18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412	CTSD	P07339	412 aa	Predicted RBP	18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412	H2AFB2	P0C5Z0	115 aa		18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412	RAG2	P55895	527 aa		18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412	PRB3	Q04118	309 aa	Predicted RBP	18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412		Q6ZNX1	250 aa		18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412	ZNF818P	Q6ZRF7	136 aa		18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412	VMO1	Q7Z5L0	202 aa		18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412	SLC38A6	Q8IZM9	456 aa		18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412	LINC00311	Q8N616	119 aa		18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412	TBX15	Q96SF7	602 aa		18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412	SIRT7	Q9NRC8	400 aa		18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412	CCL28	Q9NRJ3	127 aa		18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412	ZNRD1	Q9P1U0	126 aa		18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412	ZNF221	Q9UK13	617 aa		18.14	■□□□□ 0.49
RAP1B-213	ENST00000501412	ZAN	Q9Y493	2812 aa		18.13	■□□□□ 0.49
RAP1B-213	ENST00000501412	TRAV20	A0A0B4J274	112 aa		18.13	■□□□□ 0.49
RAP1B-213	ENST00000501412	PGAM2	P15259	253 aa		18.13	■□□□□ 0.49
RAP1B-213	ENST00000501412	PI3	P19957	117 aa		18.13	■□□□□ 0.49
RAP1B-213	ENST00000501412	GNG10	P50151	68 aa		18.13	■□□□□ 0.49
RAP1B-213	ENST00000501412	METTL11B	Q5VVY1	283 aa		18.13	■□□□□ 0.49
RAP1B-213	ENST00000501412	ODF3L1	Q8IXM7	274 aa		18.13	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms