RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 TMEM229BQ8NBD8 167 aa11.06□□□□□ -0.64
CPNE1-227ENST00000498056 OR10X1Q8NGY0 326 aa11.06□□□□□ -0.64
CPNE1-227ENST00000498056 NANPQ8TBE9 248 aa11.06□□□□□ -0.64
CPNE1-227ENST00000498056 SDHCQ99643 169 aaPredicted RBP11.06□□□□□ -0.64
CPNE1-227ENST00000498056 TAS2R8Q9NYW2 309 aa11.06□□□□□ -0.64
CPNE1-227ENST00000498056 PSG11Q9UQ72 335 aa11.06□□□□□ -0.64
CPNE1-227ENST00000498056 RBM7Q9Y580 266 aaKnown RBP11.06□□□□□ -0.64
CPNE1-227ENST00000498056 ANKRD20A5PA0PJZ0 165 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 ODF3BA8MYP8 253 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 INAFM1C9JVW0 142 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 NPFFO15130 113 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 YPEL1O60688 119 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 DIRAS3O95661 229 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 RAB3DO95716 219 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 IL7P13232 177 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 TBPP20226 339 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 SAA4P35542 130 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 RFX2P48378 723 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 UBE2E1P51965 193 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 LGALS4P56470 323 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 FXYD4P59646 89 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 AP3S2P59780 193 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 TSPAN5P62079 268 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 BAK1Q16611 211 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 HLA-DRB5Q30154 266 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 MORN2Q502X0 79 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 ZNF626Q68DY1 528 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 STEAP1BQ6NZ63 245 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 H1FOOQ8IZA3 346 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-227ENST00000498056 ZNF439Q8NDP4 499 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 OR4C16Q8NGL9 310 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 ZNF596Q8TC21 504 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 EDARADDQ8WWZ3 215 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 YPEL2Q96QA6 119 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 CCDC32Q9BV29 185 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 TINAGL1Q9GZM7 467 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-227ENST00000498056 MMP28Q9H239 520 aa11.05□□□□□ -0.64
CPNE1-227ENST00000498056 AMMECR1Q9Y4X0 333 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-227ENST00000498056 LINC00854A0A1B0GVQ3 168 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 J3QR06 171 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 FSHBP01225 129 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 AMY2AP04746 511 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 IFNA6P05013 189 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 AKAIN1P0CW23 69 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 EPHA1P21709 976 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 FCGR2CP31995 323 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 FAUP35544 74 aaKnown RBP11.04□□□□□ -0.64
CPNE1-227ENST00000498056 PPP5CP53041 499 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 PRRX1P54821 245 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 HERV-K104P61576 105 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 DYRK1AQ13627 763 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 TMEM17Q86X19 198 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 LYSMD2Q8IV50 215 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 LYG1Q8N1E2 194 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 OR11H6Q8NGC7 330 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 OR4D10Q8NGI6 311 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 OR4P4Q8NGL7 312 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 C22orf15Q8WYQ4 148 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 ZNF2Q9BSG1 426 aaPredicted RBP11.04□□□□□ -0.64
CPNE1-227ENST00000498056 MS4A7Q9GZW8 240 aaPredicted RBP11.04□□□□□ -0.64
CPNE1-227ENST00000498056 OR2D2Q9H210 308 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 ABCB10Q9NRK6 738 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 MCUBQ9NWR8 336 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 TMEM160Q9NX00 188 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 ZNF107Q9UII5 783 aaPredicted RBP11.04□□□□□ -0.64
CPNE1-227ENST00000498056 NUP50Q9UKX7 468 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 NAV3Q8IVL0 2385 aa11.04□□□□□ -0.64
CPNE1-227ENST00000498056 PPYP01298 95 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 AADACP22760 399 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 IL3RAP26951 378 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 RAB7AP51149 207 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 KLF9Q13886 244 aaPredicted RBP11.03□□□□□ -0.64
CPNE1-227ENST00000498056 MEF2DQ14814 521 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 Q3ZCU0 254 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 SCGB2B2Q4G0G5 96 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 CT45A1Q5HYN5 189 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 VAX1Q5SQQ9 334 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 SLC25A48Q6ZT89 311 aaKnown RBP11.03□□□□□ -0.64
CPNE1-227ENST00000498056 LHFPL4Q7Z7J7 247 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 BEND2Q8NDZ0 799 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 OR56B4Q8NH76 319 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 CT45A3Q8NHU0 189 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 TOMM40LQ969M1 308 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 FXYD6Q9H0Q3 95 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 C11orf54Q9H0W9 315 aaPredicted RBP11.03□□□□□ -0.64
CPNE1-227ENST00000498056 IFI27L2Q9H2X8 130 aa11.03□□□□□ -0.64
CPNE1-227ENST00000498056 NSD1Q96L73 2696 aaPredicted RBP11.02□□□□□ -0.64
CPNE1-227ENST00000498056 SAA2-SAA4A0A096LPE2 208 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 A0A0U1RQK1 487 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 DISC1C4P0D8 188 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 HSD17B6O14756 317 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 IGLV1-47P01700 117 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 CD74P04233 296 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 OR8U9P0C7N5 309 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 SAA2P0DJI9 122 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-227ENST00000498056 HTR1DP28221 377 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 GPR12P47775 334 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 ZNF134P52741 427 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 MIDNQ504T8 468 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 PLA1AQ53H76 456 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms