RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 ZNF580Q9UK33 172 aa9.22□□□□□ -0.93
NUDCD3-211ENST00000497978 YPEL1O60688 119 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 IGF1P05019 195 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 GNAO1P09471 354 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 SLC2A2P11168 524 aaPredicted RBP9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 MYF6P23409 242 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 PPP1CCP36873 323 aaKnown RBP9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 CFHR3Q02985 330 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 DEFB136Q30KP8 78 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 C9orf66Q5T8R8 295 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 GLT8D1Q68CQ7 371 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 C11orf87Q6NUJ2 197 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 LYPD6Q86Y78 171 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 MS4A15Q8N5U1 240 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 MRPL30Q8TCC3 161 aaKnown RBP9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 C4orf3Q8WVX3 66 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 KCTD7Q96MP8 289 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 YPEL2Q96QA6 119 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 ZNF251Q9BRH9 671 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 VCXQ9H320 206 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 STEAP1Q9UHE8 339 aa9.21□□□□□ -0.94
NUDCD3-211ENST00000497978 PSMB8P28062 276 aa9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 ACTBP60709 375 aa9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 GABPB1Q06547 395 aaPredicted RBP9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 GNMTQ14749 295 aa9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 ACSM3Q53FZ2 586 aa9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 LY6G6FQ5SQ64 297 aa9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 LAIR2Q6ISS4 152 aa9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 OR2AK2Q8NG84 335 aa9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 KCNG3Q8TAE7 436 aa9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 FBLIM1Q8WUP2 373 aa9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 PHYHIPQ92561 330 aa9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 MND1Q9BWT6 205 aa9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 TMEM59Q9BXS4 323 aa9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 MRPL20Q9BYC9 149 aaKnown RBP9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 CHMP1AQ9HD42 196 aaPredicted RBP9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 KIAA1456Q9P272 454 aa9.2□□□□□ -0.94
NUDCD3-211ENST00000497978 SEC14L6B5MCN3 397 aa9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 NBR2O15453 112 aa9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 HLA-DRB1P01911 266 aa9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 CHATP28329 748 aa9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 LUMP51884 338 aaPredicted RBP9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 RBM48Q5RL73 367 aaKnown RBP9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 C6orf141Q5SZD1 244 aa9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 OGFRL1Q5TC84 451 aaPredicted RBP9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 LIN54Q6MZP7 749 aa9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 ODF3L1Q8IXM7 274 aa9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 IL1F10Q8WWZ1 152 aa9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 NABP2Q9BQ15 211 aa9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 SULT4A1Q9BR01 284 aa9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 FAAP24Q9BTP7 215 aa9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 TMED9Q9BVK6 235 aa9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 OR51J1Q9H342 316 aa9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 PARP11Q9NR21 331 aa9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 FKBP14Q9NWM8 211 aa9.19□□□□□ -0.94
NUDCD3-211ENST00000497978 SAA2-SAA4A0A096LPE2 208 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 PTGES3LE9PB15 166 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 EREGO14944 169 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 CDK1P06493 297 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 OR8U8P0C7N1 319 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 NHLRC4P0CG21 123 aaPredicted RBP9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 SAA2P0DJI9 122 aaPredicted RBP9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 SRMP19623 302 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 HTR2CP28335 458 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 ECI1P42126 302 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 OR3A3P47888 321 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 RPS27AP62979 156 aaKnown RBP9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 INSL4Q14641 139 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 SPHARQ15513 63 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 HMGN3Q15651 99 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 C5orf64Q2M2E5 130 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 HSD17B12Q53GQ0 312 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 C1orf100Q5SVJ3 147 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 FAM27D1Q5T7N8 215 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 RNLSQ5VYX0 342 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 OR10K2Q6IF99 312 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 FAM71F2Q6NXP2 309 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 ZNF833PQ6ZTB9 187 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 MOB1BQ7L9L4 216 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 C6orf201Q7Z4U5 140 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 CEACAM19Q7Z692 300 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 LRRTM1Q86UE6 522 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 OR11H1Q8NG94 326 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 SETD6Q8TBK2 473 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 RBMXL1Q96E39 390 aaKnown RBP9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 UBE2E2Q96LR5 201 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 WWC2-AS2Q96NR7 200 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 ANKRD60Q9BZ19 345 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 PLEKHJ1Q9NW61 149 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 SCN3BQ9NY72 215 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 PIPOXQ9P0Z9 390 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 VSIG4Q9Y279 399 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 WSB1Q9Y6I7 421 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 DNAH3Q8TD57 4116 aa9.18□□□□□ -0.94
NUDCD3-211ENST00000497978 TRAV41A0A0B4J266 112 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 G3V318 75 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 CASQ2O14958 399 aaPredicted RBP9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 RAB29O14966 203 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 ATP6V0E1O15342 81 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 BPNT1O95861 308 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 258.8 ms