RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 GINS4Q9BRT9 223 aa16.28■□□□□ 0.2
CTSD-206ENST00000497544 CABLES2Q9BTV7 478 aa16.28■□□□□ 0.2
CTSD-206ENST00000497544 KLK11Q9UBX7 282 aa16.28■□□□□ 0.2
CTSD-206ENST00000497544 FAM96BQ9Y3D0 163 aa16.28■□□□□ 0.2
CTSD-206ENST00000497544 MGAM2Q2M2H8 2515 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 IGKV1-6A0A0C4DH72 117 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 A0A1W2PPE3 182 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 ODF3BA8MYP8 253 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 DIRAS3O95661 229 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 NAT1P18440 290 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 RCVRNP35243 200 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 SAA4P35542 130 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 ETV6P41212 452 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 OR3A3P47888 321 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 DGCR2P98153 550 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 HERPUD1Q15011 391 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 LY6G6FQ5SQ64 297 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 BCL6BQ8N143 479 aaPredicted RBP16.27■□□□□ 0.2
CTSD-206ENST00000497544 OR5AP2Q8NGF4 316 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 CREB3L1Q96BA8 519 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 OR1A1Q9P1Q5 309 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 MTFP1Q9UDX5 166 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 ANAPC10Q9UM13 185 aa16.27■□□□□ 0.2
CTSD-206ENST00000497544 TBL2Q9Y4P3 447 aaKnown RBP16.27■□□□□ 0.2
CTSD-206ENST00000497544 TRBV6-7A0A0A0MS04 114 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 IGLV1-47P01700 117 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 HTR1DP28221 377 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 ACTBP60709 375 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 ACTG1P63261 375 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 HLA-DRB5Q30154 266 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 MINOS1Q5TGZ0 78 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 LINC00299Q6ZSB3 139 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 C8orf31Q8N9H6 132 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 OR10X1Q8NGY0 326 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 SMIM4Q8WVI0 70 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 SNAPC3Q92966 411 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 MMP28Q9H239 520 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 NECAP2Q9NVZ3 263 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 DPM3Q9P2X0 92 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 AMMECR1Q9Y4X0 333 aaPredicted RBP16.26■□□□□ 0.19
CTSD-206ENST00000497544 MINOS1-NBL1R4GNA1 71 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 V9GYH0 126 aa16.26■□□□□ 0.19
CTSD-206ENST00000497544 GSTZ1O43708 216 aaPredicted RBP16.25■□□□□ 0.19
CTSD-206ENST00000497544 TAS2R46P59540 309 aa16.25■□□□□ 0.19
CTSD-206ENST00000497544 CT45A1Q5HYN5 189 aa16.25■□□□□ 0.19
CTSD-206ENST00000497544 SLC25A48Q6ZT89 311 aaKnown RBP16.25■□□□□ 0.19
CTSD-206ENST00000497544 C9orf139Q6ZV77 190 aa16.25■□□□□ 0.19
CTSD-206ENST00000497544 LYSMD2Q8IV50 215 aa16.25■□□□□ 0.19
CTSD-206ENST00000497544 LINC00311Q8N616 119 aa16.25■□□□□ 0.19
CTSD-206ENST00000497544 OR2AK2Q8NG84 335 aa16.25■□□□□ 0.19
CTSD-206ENST00000497544 OR4P4Q8NGL7 312 aa16.25■□□□□ 0.19
CTSD-206ENST00000497544 OR5H2Q8NGV7 314 aa16.25■□□□□ 0.19
CTSD-206ENST00000497544 CT45A3Q8NHU0 189 aa16.25■□□□□ 0.19
CTSD-206ENST00000497544 EDARADDQ8WWZ3 215 aa16.25■□□□□ 0.19
CTSD-206ENST00000497544 MALSU1Q96EH3 234 aa16.25■□□□□ 0.19
CTSD-206ENST00000497544 RDH8Q9NYR8 311 aa16.25■□□□□ 0.19
CTSD-206ENST00000497544 SOX21Q9Y651 276 aaPredicted RBP16.25■□□□□ 0.19
CTSD-206ENST00000497544 A0A0U1RQK1 487 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 LEUTXA8MZ59 168 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 BUB1B-PAK6H3BSN5 160 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 SLC31A2O15432 143 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 PMP2P02689 132 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 HLA-DMAP28067 261 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 CEACAM3P40198 252 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 ZNF134P52741 427 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 ZNF45Q02386 682 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 SSBP1Q04837 148 aaKnown RBP16.24■□□□□ 0.19
CTSD-206ENST00000497544 CDK10Q15131 360 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 LHFPL4Q7Z7J7 247 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 ZNF439Q8NDP4 499 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 ZDHHC16Q969W1 377 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 ABHD14AQ9BUJ0 271 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 OCEL1Q9H607 264 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 ZNRD1Q9P1U0 126 aa16.24■□□□□ 0.19
CTSD-206ENST00000497544 RBM7Q9Y580 266 aaKnown RBP16.24■□□□□ 0.19
CTSD-206ENST00000497544 TENM1Q9UKZ4 2725 aa16.23■□□□□ 0.19
CTSD-206ENST00000497544 ITGB1BP1O14713 200 aa16.23■□□□□ 0.19
CTSD-206ENST00000497544 FBP1P09467 338 aa16.23■□□□□ 0.19
CTSD-206ENST00000497544 IL3RAP26951 378 aa16.23■□□□□ 0.19
CTSD-206ENST00000497544 RAB7AP51149 207 aa16.23■□□□□ 0.19
CTSD-206ENST00000497544 ZNF79Q15937 498 aa16.23■□□□□ 0.19
CTSD-206ENST00000497544 DEFB112Q30KQ8 113 aa16.23■□□□□ 0.19
CTSD-206ENST00000497544 Q8N402 240 aa16.23■□□□□ 0.19
CTSD-206ENST00000497544 THAP7Q9BT49 309 aaPredicted RBP16.23■□□□□ 0.19
CTSD-206ENST00000497544 TOLLIPQ9H0E2 274 aa16.23■□□□□ 0.19
CTSD-206ENST00000497544 C11orf54Q9H0W9 315 aaPredicted RBP16.23■□□□□ 0.19
CTSD-206ENST00000497544 TAS2R8Q9NYW2 309 aa16.23■□□□□ 0.19
CTSD-206ENST00000497544 EHFQ9NZC4 300 aa16.23■□□□□ 0.19
CTSD-206ENST00000497544 ZNF736B4DX44 427 aaPredicted RBP16.22■□□□□ 0.19
CTSD-206ENST00000497544 OR5H8P0DN80 308 aa16.22■□□□□ 0.19
CTSD-206ENST00000497544 NFYAP23511 347 aaPredicted RBP16.22■□□□□ 0.19
CTSD-206ENST00000497544 SSX2Q16385 188 aa16.22■□□□□ 0.19
CTSD-206ENST00000497544 PDLIM3Q53GG5 364 aaPredicted RBP16.22■□□□□ 0.19
CTSD-206ENST00000497544 RBMS3Q6XE24 437 aaKnown RBP16.22■□□□□ 0.19
CTSD-206ENST00000497544 H1FOOQ8IZA3 346 aaPredicted RBP16.22■□□□□ 0.19
CTSD-206ENST00000497544 LYG1Q8N1E2 194 aa16.22■□□□□ 0.19
CTSD-206ENST00000497544 C17orf50Q8WW18 174 aa16.22■□□□□ 0.19
CTSD-206ENST00000497544 S100ZQ8WXG8 99 aa16.22■□□□□ 0.19
CTSD-206ENST00000497544 RPEQ96AT9 228 aa16.22■□□□□ 0.19
CTSD-206ENST00000497544 SLC6A7Q99884 636 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms