RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 BBS1Q8NFJ9 593 aa8.66□□□□□ -1.02
ATG3-209ENST00000496423 UBALD1Q8TB05 177 aa8.66□□□□□ -1.02
ATG3-209ENST00000496423 CCDC107Q8WV48 283 aa8.66□□□□□ -1.02
ATG3-209ENST00000496423 GHSRQ92847 366 aa8.66□□□□□ -1.02
ATG3-209ENST00000496423 FGGYQ96C11 551 aa8.66□□□□□ -1.02
ATG3-209ENST00000496423 CPNE2Q96FN4 548 aaPredicted RBP8.66□□□□□ -1.02
ATG3-209ENST00000496423 NSMCE2Q96MF7 247 aa8.66□□□□□ -1.02
ATG3-209ENST00000496423 RNF5Q99942 180 aa8.66□□□□□ -1.02
ATG3-209ENST00000496423 C11orf68Q9H3H3 251 aaKnown RBP8.66□□□□□ -1.02
ATG3-209ENST00000496423 H2AFY2Q9P0M6 372 aaPredicted RBP8.66□□□□□ -1.02
ATG3-209ENST00000496423 PKD1P98161 4303 aa8.66□□□□□ -1.02
ATG3-209ENST00000496423 DMBT1Q9UGM3 2413 aaPredicted RBP8.65□□□□□ -1.02
ATG3-209ENST00000496423 C2orf70A6NJV1 201 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 PRR32B1ATL7 298 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 MT-ND2P03891 347 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 SCTP09683 121 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 FXYD3Q14802 87 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 C6orf183Q5T699 404 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 PVRIGQ6DKI7 326 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 TRAT1Q6PIZ9 186 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 HACD2Q6Y1H2 254 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 RBPMS2Q6ZRY4 209 aaKnown RBP8.65□□□□□ -1.02
ATG3-209ENST00000496423 TMEM179BQ7Z7N9 219 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 SLC35F2Q8IXU6 374 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 SUMF2Q8NBJ7 301 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 OR10V1Q8NGI7 309 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 GRPEL2Q8TAA5 225 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 NEK7Q8TDX7 302 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 MRPL20Q9BYC9 149 aaKnown RBP8.65□□□□□ -1.02
ATG3-209ENST00000496423 C6orf62Q9GZU0 229 aaPredicted RBP8.65□□□□□ -1.02
ATG3-209ENST00000496423 REEP1Q9H902 201 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 METTL1Q9UBP6 276 aaKnown RBP8.65□□□□□ -1.02
ATG3-209ENST00000496423 GAB2Q9UQC2 676 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 HSPG2P98160 4391 aa8.65□□□□□ -1.02
ATG3-209ENST00000496423 DNAH17Q9UFH2 4485 aa8.65□□□□□ -1.03
ATG3-209ENST00000496423 DNAH2Q9P225 4427 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 LOC107986453A0A1B0GWG9 222 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 H7C2Y5 167 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 AIPO00170 330 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 ARPC2O15144 300 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 MAGEB4O15481 346 aaPredicted RBP8.64□□□□□ -1.03
ATG3-209ENST00000496423 EDF1O60869 148 aaKnown RBP8.64□□□□□ -1.03
ATG3-209ENST00000496423 TUSC2O75896 110 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 CA2P00918 260 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 TRBV12-3P01733 135 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 INAFM2P0DMQ5 153 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 VAMP1P23763 118 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 KCTD20Q7Z5Y7 419 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 PRR18Q8N4B5 295 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 OR1L6Q8NGR2 347 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 ADAT3Q96EY9 351 aaPredicted RBP8.64□□□□□ -1.03
ATG3-209ENST00000496423 ABHD14AQ9BUJ0 271 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 ALG8Q9BVK2 526 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 COA4Q9NYJ1 87 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 ABCD2Q9UBJ2 740 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 TRAPPC2LQ9UL33 140 aa8.64□□□□□ -1.03
ATG3-209ENST00000496423 IGHV4-4A0A075B6R2 117 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 TRAV25A0A0B4J276 109 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 OR5H14A6NHG9 310 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 EPM2AB3EWF7 344 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 FADS2O95864 444 aaKnown RBP8.63□□□□□ -1.03
ATG3-209ENST00000496423 T-ENOLP0DO92 83 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 COX4I1P13073 169 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 CBLN1P23435 193 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 PSME3P61289 254 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 RSU1Q15404 277 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 MORN2Q502X0 79 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 C8orf82Q6P1X6 216 aaPredicted RBP8.63□□□□□ -1.03
ATG3-209ENST00000496423 TMEM61Q8N0U2 210 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 OR2C3Q8N628 320 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 PXT1Q8NFP0 134 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 GALNT14Q96FL9 552 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 TSNAXQ99598 290 aaKnown RBP8.63□□□□□ -1.03
ATG3-209ENST00000496423 NIPSNAP1Q9BPW8 284 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 OR2S2Q9NQN1 319 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 CLN6Q9NWW5 311 aa8.63□□□□□ -1.03
ATG3-209ENST00000496423 RCC2Q9P258 522 aaKnown RBP8.63□□□□□ -1.03
ATG3-209ENST00000496423 SAMHD1Q9Y3Z3 626 aaKnown RBP8.63□□□□□ -1.03
ATG3-209ENST00000496423 TRAV10A0A0B4J240 114 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 METTL15A6NJ78 407 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 LGALS9O00182 355 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 OR7C1O76099 320 aaPredicted RBP8.62□□□□□ -1.03
ATG3-209ENST00000496423 SCAF4O95104 1147 aaKnown RBP8.62□□□□□ -1.03
ATG3-209ENST00000496423 HTR3BO95264 441 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 RBMY1A1P0DJD3 496 aaKnown RBP8.62□□□□□ -1.03
ATG3-209ENST00000496423 CDK5Q00535 292 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 PPP1R8Q12972 351 aaKnown RBP8.62□□□□□ -1.03
ATG3-209ENST00000496423 GK3PQ14409 553 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 KISS1Q15726 138 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 MRGPRG-AS1Q2M3A8 158 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 ATAD3CQ5T2N8 411 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 FAM71F2Q6NXP2 309 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 FAM131AQ6UXB0 335 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 ZNF833PQ6ZTB9 187 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 OR10G2Q8NGC3 310 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 OR13C9Q8NGT0 318 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 GPER1Q99527 375 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 PARP12Q9H0J9 701 aaKnown RBP8.62□□□□□ -1.03
ATG3-209ENST00000496423 IFT22Q9H7X7 185 aa8.62□□□□□ -1.03
ATG3-209ENST00000496423 ZNF556Q9HAH1 456 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms