RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ABCG5Q9H222 651 aa12.43□□□□□ -0.42
HDAC4-213ENST00000496347 RAB26Q9ULW5 256 aa12.43□□□□□ -0.42
HDAC4-213ENST00000496347 TRBV6-6A0A0A6YYG2 114 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 BLVRBP30043 206 aaPredicted RBP12.42□□□□□ -0.42
HDAC4-213ENST00000496347 PSMD7P51665 324 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 GABARAPL2P60520 117 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 FABP5Q01469 135 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 P2RY14Q15391 338 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 ZNF880Q6PDB4 577 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 ZNF329Q86UD4 541 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 STPG2Q8N412 459 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 WFDC9Q8NEX5 89 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 OR51D1Q8NGF3 324 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 OR52L2PQ8NGH6 319 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 CYYR1Q96J86 154 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 NOL4LQ96MY1 436 aaPredicted RBP12.42□□□□□ -0.42
HDAC4-213ENST00000496347 FAAP24Q9BTP7 215 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 GON7Q9BXV9 100 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 LPAR5Q9H1C0 372 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 CHMP1AQ9HD42 196 aaPredicted RBP12.42□□□□□ -0.42
HDAC4-213ENST00000496347 C12orf4Q9NQ89 552 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 PLEKHJ1Q9NW61 149 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 NDUFB11Q9NX14 153 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 STEAP1Q9UHE8 339 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 ZNF580Q9UK33 172 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 HSF4Q9ULV5 492 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 MGAT4AQ9UM21 535 aa12.42□□□□□ -0.42
HDAC4-213ENST00000496347 A0A0A6YYD4 124 aa12.41□□□□□ -0.42
HDAC4-213ENST00000496347 RRP9O43818 475 aaKnown RBP12.41□□□□□ -0.42
HDAC4-213ENST00000496347 MRPS14O60783 128 aaKnown RBP12.41□□□□□ -0.42
HDAC4-213ENST00000496347 MAP2K4P45985 399 aa12.41□□□□□ -0.42
HDAC4-213ENST00000496347 RPL23AP62750 156 aaKnown RBP12.41□□□□□ -0.42
HDAC4-213ENST00000496347 OXLD1Q5BKU9 147 aa12.41□□□□□ -0.42
HDAC4-213ENST00000496347 ZNF833PQ6ZTB9 187 aa12.41□□□□□ -0.42
HDAC4-213ENST00000496347 FAM89BQ8N5H3 189 aa12.41□□□□□ -0.42
HDAC4-213ENST00000496347 PHF21AQ96BD5 680 aa12.41□□□□□ -0.42
HDAC4-213ENST00000496347 S1PR3Q99500 378 aa12.41□□□□□ -0.42
HDAC4-213ENST00000496347 IFI27L2Q9H2X8 130 aa12.41□□□□□ -0.42
HDAC4-213ENST00000496347 PLSCR3Q9NRY6 295 aa12.41□□□□□ -0.42
HDAC4-213ENST00000496347 NECAP2Q9NVZ3 263 aa12.41□□□□□ -0.42
HDAC4-213ENST00000496347 AK6Q9Y3D8 172 aaKnown RBP12.41□□□□□ -0.42
HDAC4-213ENST00000496347 SAA2-SAA4A0A096LPE2 208 aa12.4□□□□□ -0.42
HDAC4-213ENST00000496347 FOXI3A8MTJ6 420 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-213ENST00000496347 ZNF736B4DX44 427 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-213ENST00000496347 DUS4LO95620 317 aaKnown RBP12.4□□□□□ -0.42
HDAC4-213ENST00000496347 SAA2P0DJI9 122 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-213ENST00000496347 Q6ZPA2 131 aa12.4□□□□□ -0.42
HDAC4-213ENST00000496347 ODF3L1Q8IXM7 274 aa12.4□□□□□ -0.42
HDAC4-213ENST00000496347 IL1F10Q8WWZ1 152 aa12.4□□□□□ -0.42
HDAC4-213ENST00000496347 RCC1LQ96I51 464 aaKnown RBP12.4□□□□□ -0.42
HDAC4-213ENST00000496347 RASL11BQ9BPW5 248 aa12.4□□□□□ -0.42
HDAC4-213ENST00000496347 MRPL20Q9BYC9 149 aaKnown RBP12.4□□□□□ -0.42
HDAC4-213ENST00000496347 ZFP57Q9NU63 452 aa12.4□□□□□ -0.42
HDAC4-213ENST00000496347 V9GY05 133 aa12.4□□□□□ -0.42
HDAC4-213ENST00000496347 ATP6V1G2O95670 118 aa12.39□□□□□ -0.43
HDAC4-213ENST00000496347 GALP22466 123 aa12.39□□□□□ -0.43
HDAC4-213ENST00000496347 SOX6P35712 828 aa12.39□□□□□ -0.43
HDAC4-213ENST00000496347 HLA-DRB3P79483 266 aa12.39□□□□□ -0.43
HDAC4-213ENST00000496347 MMDQ15546 238 aa12.39□□□□□ -0.43
HDAC4-213ENST00000496347 SSX1Q16384 188 aa12.39□□□□□ -0.43
HDAC4-213ENST00000496347 TEX38Q6PEX7 206 aa12.39□□□□□ -0.43
HDAC4-213ENST00000496347 CD200R1LQ6Q8B3 271 aa12.39□□□□□ -0.43
HDAC4-213ENST00000496347 OR56B1Q8NGI3 324 aa12.39□□□□□ -0.43
HDAC4-213ENST00000496347 FAM3DQ96BQ1 224 aa12.39□□□□□ -0.43
HDAC4-213ENST00000496347 PIPOXQ9P0Z9 390 aa12.39□□□□□ -0.43
HDAC4-213ENST00000496347 SLC23A1Q9UHI7 598 aa12.39□□□□□ -0.43
HDAC4-213ENST00000496347 AK3Q9UIJ7 227 aa12.39□□□□□ -0.43
HDAC4-213ENST00000496347 TRAV1-2A0A0B4J238 106 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 ITGB1BP1O14713 200 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 PDCD5O14737 125 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 RAB29O14966 203 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 LDLRAD4O15165 306 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 SOCS1O15524 211 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 OR5H8P0DN80 308 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 MYL9P24844 172 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 FOXE3Q13461 319 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 LINC00482Q8N8I6 264 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 RNF152Q8N8N0 203 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 SETD6Q8TBK2 473 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 EDARADDQ8WWZ3 215 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 NABP2Q9BQ15 211 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 GPR61Q9BZJ8 451 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 GHITMQ9H3K2 345 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 Q9H521 79 aa12.38□□□□□ -0.43
HDAC4-213ENST00000496347 NUDT19A8MXV4 375 aa12.37□□□□□ -0.43
HDAC4-213ENST00000496347 IGF1P05019 195 aa12.37□□□□□ -0.43
HDAC4-213ENST00000496347 VDAC1P21796 283 aa12.37□□□□□ -0.43
HDAC4-213ENST00000496347 OR3A3P47888 321 aa12.37□□□□□ -0.43
HDAC4-213ENST00000496347 F2RL1P55085 397 aa12.37□□□□□ -0.43
HDAC4-213ENST00000496347 CLDN12P56749 244 aa12.37□□□□□ -0.43
HDAC4-213ENST00000496347 ACTBP60709 375 aa12.37□□□□□ -0.43
HDAC4-213ENST00000496347 CFHR3Q02985 330 aa12.37□□□□□ -0.43
HDAC4-213ENST00000496347 CXorf66Q5JRM2 361 aaPredicted RBP12.37□□□□□ -0.43
HDAC4-213ENST00000496347 ETV3LQ6ZN32 361 aa12.37□□□□□ -0.43
HDAC4-213ENST00000496347 KLHL30-AS1Q8NEE0 82 aa12.37□□□□□ -0.43
HDAC4-213ENST00000496347 FCGR1BQ92637 280 aa12.37□□□□□ -0.43
HDAC4-213ENST00000496347 ARHGAP5-AS1Q96IT6 56 aa12.37□□□□□ -0.43
HDAC4-213ENST00000496347 HSPB9Q9BQS6 159 aa12.37□□□□□ -0.43
HDAC4-213ENST00000496347 ZNF107Q9UII5 783 aaPredicted RBP12.37□□□□□ -0.43
HDAC4-213ENST00000496347 LINC00527Q9UJ94 153 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms