RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 TGIF2-C20orf24A0A0A6YYL0 155 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 IGKV6-21A0A0C4DH24 114 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 A0A1W2PP18 115 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 TMEM223A0PJW6 202 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 PTPRTO14522 1441 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 STK16O75716 305 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 PCF11O94913 1555 aaKnown RBP2.21□□□□□ -2.06
CLK1-214ENST00000496205 C1GALT1C1LP0DN25 315 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 OR12D1P0DN82 309 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 GTF2F2P13984 249 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 IL1RNP18510 177 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 CXCL3P19876 107 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 CNTFRP26992 372 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 TGFBR2P37173 567 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 ARPC4P59998 168 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 RAB2AP61019 212 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 DYNLL1P63167 89 aaKnown RBP2.21□□□□□ -2.06
CLK1-214ENST00000496205 HLA-DRB3P79483 266 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 ACSBG2Q5FVE4 666 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 TRIQKQ629K1 86 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 ZNF550Q7Z398 422 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 TAC4Q86UU9 113 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 PDPNQ86YL7 162 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 TMEM86BQ8N661 226 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 ZNF645Q8N7E2 425 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 OR2M3Q8NG83 312 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 OR9A2Q8NGT5 310 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 OR8S1Q8NH09 359 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 OR52N1Q8NH53 320 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 MCFD2Q8NI22 146 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 CIRBP-AS1Q8TBR5 109 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 DYDC1Q8WWB3 177 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 YIPF5Q969M3 257 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 DIRAS2Q96HU8 199 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 ANKRD36BP1Q96IX9 119 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 TRIB3Q96RU7 358 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 CMSS1Q9BQ75 279 aaKnown RBP2.21□□□□□ -2.06
CLK1-214ENST00000496205 KIFC1Q9BW19 673 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 DCSTAMPQ9H295 470 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 BOLA2Q9H3K6 86 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 TXNIPQ9H3M7 391 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 TRABDQ9H4I3 376 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 GID8Q9NWU2 228 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 HHLA2Q9UM44 414 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 ARAP3Q8WWN8 1544 aa2.21□□□□□ -2.06
CLK1-214ENST00000496205 DNMT1P26358 1616 aaKnown RBP2.2□□□□□ -2.06
CLK1-214ENST00000496205 SETD1AO15047 1707 aaKnown RBP2.2□□□□□ -2.06
CLK1-214ENST00000496205 IGHV1-45A0A0A0MS14 117 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 C5orf63A6NC05 138 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 EVPLLA8MZ36 301 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 ISLRO14498 428 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 KLRC4O43908 158 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 OR7C1O76099 320 aaPredicted RBP2.2□□□□□ -2.06
CLK1-214ENST00000496205 KCNK2O95069 426 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 CNIH1O95406 144 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 IGHG2P01859 326 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 TTRP02766 147 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 FAM228BP0C875 321 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 IFI30P13284 250 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 CBR1P16152 277 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 ZNF708P17019 499 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 ZNF32P17041 273 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 CXCL2P19875 107 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 OR10J1P30954 320 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 CXCL12P48061 93 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 PSMB3P49720 205 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 CDK9P50750 372 aaKnown RBP2.2□□□□□ -2.06
CLK1-214ENST00000496205 SNAP25P60880 206 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 TFAMQ00059 246 aaKnown RBP2.2□□□□□ -2.06
CLK1-214ENST00000496205 IFITM2Q01629 132 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 BTN1A1Q13410 526 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 PMAIP1Q13794 54 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 MMDQ15546 238 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 ALX1Q15699 326 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 LINC00483Q53H64 154 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 MRPL2Q5T653 305 aaKnown RBP2.2□□□□□ -2.06
CLK1-214ENST00000496205 FAM104BQ5XKR9 115 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 SMARCD3Q6STE5 483 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 SAXO1Q8IYX7 474 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 UBL4BQ8N7F7 174 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 OR2Z1Q8NG97 314 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 OR9I1Q8NGQ6 314 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 OR4X1Q8NH49 305 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 SPPL2BQ8TCT7 592 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 FXYD5Q96DB9 178 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 MS4A6EQ96DS6 147 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 SIGMAR1Q99720 223 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 GNB1LQ9BYB4 327 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 GTSF1LQ9H1H1 148 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 ARMC1Q9NVT9 282 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 ANGPT4Q9Y264 503 aa2.2□□□□□ -2.06
CLK1-214ENST00000496205 CARHSP1Q9Y2V2 147 aaKnown RBP2.2□□□□□ -2.06
CLK1-214ENST00000496205 AHDC1Q5TGY3 1603 aaPredicted RBP2.2□□□□□ -2.06
CLK1-214ENST00000496205 MIA3Q5JRA6 1907 aa2.19□□□□□ -2.06
CLK1-214ENST00000496205 A0A087WUJ7 227 aa2.19□□□□□ -2.06
CLK1-214ENST00000496205 IGHV1-3A0A0C4DH29 117 aa2.19□□□□□ -2.06
CLK1-214ENST00000496205 A0A1B0GV72 72 aa2.19□□□□□ -2.06
CLK1-214ENST00000496205 GNG14A0A1W2PPG7 69 aa2.19□□□□□ -2.06
CLK1-214ENST00000496205 VPS37CA5D8V6 355 aaPredicted RBP2.19□□□□□ -2.06
CLK1-214ENST00000496205 EEF1E1-BLOC1S5C9J1V9 151 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms