RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 MSL2Q9HCI7 577 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 KCNJ16Q9NPI9 418 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 UFSP2Q9NUQ7 469 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 FZR1Q9UM11 496 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 C12orf77C9JDV5 145 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 IGKV1-5P01602 117 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 NFYBP25208 207 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 TAS2R30P59541 319 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 RAB2AP61019 212 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 CATR1Q13166 79 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 EIF2S3LQ2VIR3 472 aaKnown RBP9.31□□□□□ -0.92
CMSS1-208ENST00000496116 ZNF585BQ52M93 769 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 IGFL3Q6UXB1 125 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 Q6ZR03 302 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 Q6ZRM9 215 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 OR1L1Q8NH94 360 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 SCRT1Q9BWW7 348 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 TOLLIPQ9H0E2 274 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 OR2D2Q9H210 308 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 SMCO4Q9NRQ5 59 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 PSENENQ9NZ42 101 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 TTC28Q96AY4 2481 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 INTS1Q8N201 2190 aaKnown RBP9.31□□□□□ -0.92
CMSS1-208ENST00000496116 FAM90A26D6RGX4 464 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 H3BP45 60 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 HBZP02008 142 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 PPP1CCP36873 323 aaKnown RBP9.31□□□□□ -0.92
CMSS1-208ENST00000496116 HBG1P69891 147 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 HBG2P69892 147 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 TLE4Q04727 773 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 MSMO1Q15800 293 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 IZUMO4Q1ZYL8 232 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 KIAA2026Q5HYC2 2103 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 KRBOX4Q5JUW0 171 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 FGFRL1Q8N441 504 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 COA4Q9NYJ1 87 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 FBXO7Q9Y3I1 522 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 SLC25A15Q9Y619 301 aa9.31□□□□□ -0.92
CMSS1-208ENST00000496116 A0A1B0GV50 99 aa9.3□□□□□ -0.92
CMSS1-208ENST00000496116 MED19A0JLT2 244 aaPredicted RBP9.3□□□□□ -0.92
CMSS1-208ENST00000496116 PTBP3O95758 552 aaKnown RBP9.3□□□□□ -0.92
CMSS1-208ENST00000496116 COL10A1Q03692 680 aa9.3□□□□□ -0.92
CMSS1-208ENST00000496116 TMEM267Q0VDI3 215 aaPredicted RBP9.3□□□□□ -0.92
CMSS1-208ENST00000496116 TRAT1Q6PIZ9 186 aa9.3□□□□□ -0.92
CMSS1-208ENST00000496116 TCTEX1D1Q8N7M0 179 aa9.3□□□□□ -0.92
CMSS1-208ENST00000496116 SCGB1C1Q8TD33 95 aa9.3□□□□□ -0.92
CMSS1-208ENST00000496116 MRGPRDQ8TDS7 321 aa9.3□□□□□ -0.92
CMSS1-208ENST00000496116 LURAP1Q96LR2 239 aa9.3□□□□□ -0.92
CMSS1-208ENST00000496116 UNKLQ9H9P5 680 aaKnown RBP9.3□□□□□ -0.92
CMSS1-208ENST00000496116 RPS10P5Q9NQ39 176 aa9.3□□□□□ -0.92
CMSS1-208ENST00000496116 PRELID3BQ9Y3B1 194 aa9.3□□□□□ -0.92
CMSS1-208ENST00000496116 MMP24Q9Y5R2 645 aa9.3□□□□□ -0.92
CMSS1-208ENST00000496116 EP300Q09472 2414 aaPredicted RBP9.3□□□□□ -0.92
CMSS1-208ENST00000496116 ZNF318Q5VUA4 2279 aa9.3□□□□□ -0.92
CMSS1-208ENST00000496116 A0A1B0GWJ7 208 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 HBE1P02100 147 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 IAPPP10997 89 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 RUNX1Q01196 453 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 AKIRIN2Q53H80 203 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 ZNF295-AS1Q8N0V1 137 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 OR52L2PQ8NGH6 319 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 COQ2Q96H96 371 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 KIAA1456Q9P272 454 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 RBFOX3A6NFN3 312 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 M0R036 132 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 PAX6P26367 422 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 PAX5Q02548 391 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 AWAT1Q58HT5 328 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 TIMM23BQ5SRD1 257 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 SEM1Q6ZVN7 128 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 THNSL2Q86YJ6 484 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 C15orf54Q8N8G6 183 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 OR2Z1Q8NG97 314 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 LRRC29Q8WV35 223 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 RBMXL1Q96E39 390 aaKnown RBP9.29□□□□□ -0.92
CMSS1-208ENST00000496116 ABHD14AQ9BUJ0 271 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 HIPK2Q9H2X6 1198 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 RNF150Q9ULK6 438 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 LAMP3Q9UQV4 416 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 RFNGQ9Y644 331 aa9.29□□□□□ -0.92
CMSS1-208ENST00000496116 GTF3C1Q12789 2109 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 HEATR1Q9H583 2144 aaKnown RBP9.28□□□□□ -0.92
CMSS1-208ENST00000496116 SPINT2O43291 252 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 UBE2KP61086 200 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 RTP5Q14D33 572 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 AVPI1Q5T686 147 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 SPSB3Q6PJ21 355 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 Q6ZS92 163 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 FAM90A1Q86YD7 464 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 LILRB2Q8N423 598 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 PPP1R35Q8TAP8 253 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 CD300LFQ8TDQ1 290 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 WASF3Q9UPY6 502 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 CRYAAP02489 173 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 CRYABP02511 175 aaKnown RBP9.28□□□□□ -0.92
CMSS1-208ENST00000496116 ADH4P08319 380 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 SNRNP70P08621 437 aaKnown RBP9.28□□□□□ -0.92
CMSS1-208ENST00000496116 METTL15P1P0C7V9 234 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 PRDX2P32119 198 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 GLIPR1P48060 266 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms