RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ISOC1Q96CN7 298 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 SPACA5Q96QH8 159 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 NKX3-1Q99801 234 aaPredicted RBP5.17□□□□□ -1.58
VIM-207ENST00000495528 PAPOLGQ9BWT3 736 aaKnown RBP5.17□□□□□ -1.58
VIM-207ENST00000495528 SIRPDQ9H106 197 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 C16orf95Q9H693 158 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 OPA3Q9H6K4 179 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 UFSP2Q9NUQ7 469 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 CKLFQ9UBR5 152 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 GAGE2DQ9UEU5 116 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 FOXJ3Q9UPW0 622 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 SLC7A11Q9UPY5 501 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 MPC1Q9Y5U8 109 aa5.17□□□□□ -1.58
VIM-207ENST00000495528 DOCK11Q5JSL3 2073 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 IGKV1-9A0A0C4DH69 117 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 SMIM31A0A1B0GVY4 71 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 ANXA2P2A6NMY6 339 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 DHRS7CA6NNS2 312 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 ZNF732B4DXR9 585 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 H3BMQ9 156 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 LGALS8O00214 317 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 PDCD5O14737 125 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 MAGEB3O15480 346 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 ADAM20O43506 726 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 GABARAPO95166 117 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 HCKP08631 526 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 IGFBP3P17936 291 aaPredicted RBP5.16□□□□□ -1.58
VIM-207ENST00000495528 RAB3BP20337 219 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 AZGP1P25311 298 aaKnown RBP5.16□□□□□ -1.58
VIM-207ENST00000495528 CD200P41217 278 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 GPM6AP51674 278 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 ATP1B3P54709 279 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 MTCP1P56278 107 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 OR10A3P58181 314 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 PPP3R1P63098 170 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 CEACAM21Q3KPI0 293 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 METTL11BQ5VVY1 283 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 UTS2BQ765I0 119 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 BTN2A1Q7KYR7 527 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 LRRTM1Q86UE6 522 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 TPRA1Q86W33 373 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 ANGPTL5Q86XS5 388 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 FTMTQ8N4E7 242 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 OR5A2Q8NGI9 324 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 OR8S1Q8NH09 359 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 NDNFQ8TB73 568 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 RAB2BQ8WUD1 216 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 PP6455Q8WZ26 134 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 OR5P3Q8WZ94 311 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 THRSPQ92748 146 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 ITFG2Q969R8 447 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 RFT1Q96AA3 541 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 C10orf35Q96D05 121 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 GPER1Q99527 375 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 DCSTAMPQ9H295 470 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 TMEM138Q9NPI0 162 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 RSL24D1Q9UHA3 163 aaKnown RBP5.16□□□□□ -1.58
VIM-207ENST00000495528 ING4Q9UNL4 249 aa5.16□□□□□ -1.58
VIM-207ENST00000495528 IGKV1-27A0A075B6S5 117 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 SLC22A1O15245 554 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 SULT1B1O43704 296 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 CIDEAO60543 219 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 GYPAP02724 150 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 ALDOBP05062 364 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 SLC2A2P11168 524 aaPredicted RBP5.15□□□□□ -1.59
VIM-207ENST00000495528 PRKACBP22694 351 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 ZNF93P35789 620 aaPredicted RBP5.15□□□□□ -1.59
VIM-207ENST00000495528 RBP2P50120 134 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 PSMD7P51665 324 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 PRB3Q04118 309 aaPredicted RBP5.15□□□□□ -1.59
VIM-207ENST00000495528 KISS1Q15726 138 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 KCNJ8Q15842 424 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 FAM189A2Q15884 450 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 C2orf76Q3KRA6 126 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 IDNKQ5T6J7 187 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 KPRPQ5T749 579 aaPredicted RBP5.15□□□□□ -1.59
VIM-207ENST00000495528 HES5Q5TA89 166 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 DDI2Q5TDH0 399 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 GLT8D1Q68CQ7 371 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 TMEM42Q69YG0 159 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 DHRS7BQ6IAN0 325 aaPredicted RBP5.15□□□□□ -1.59
VIM-207ENST00000495528 SLC35E4Q6ICL7 350 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 ZNF826PQ6ZT77 177 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 KRT74Q7RTS7 529 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 FGFRL1Q8N441 504 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 JAGN1Q8N5M9 183 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 SPERTQ8NA61 448 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 BORCS8Q96FH0 119 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 ABHD1Q96SE0 405 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 MICU1Q9BPX6 476 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 BCL7BQ9BQE9 202 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 DCUN1D5Q9BTE7 237 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 ADAT1Q9BUB4 502 aaKnown RBP5.15□□□□□ -1.59
VIM-207ENST00000495528 RTL8AQ9BWD3 113 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 CHST5Q9GZS9 411 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 FAM192AQ9GZU8 254 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 FGF23Q9GZV9 251 aaPredicted RBP5.15□□□□□ -1.59
VIM-207ENST00000495528 SLC22A4Q9H015 551 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 DPAGT1Q9H3H5 408 aa5.15□□□□□ -1.59
VIM-207ENST00000495528 FN3KRPQ9HA64 309 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms