RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 TPPP2P59282 170 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 ADARB1P78563 741 aaKnown RBP10.96□□□□□ -0.65
VARS-228ENST00000495010 RAB40BQ12829 278 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 RIPK1Q13546 671 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 LRRC36Q1X8D7 754 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 ACTBL2Q562R1 376 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 Q8N1Y9 231 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 OR52L2PQ8NGH6 319 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 IL17DQ8TAD2 202 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 RGP1Q92546 391 aaPredicted RBP10.96□□□□□ -0.65
VARS-228ENST00000495010 MS4A10Q96PG2 267 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 ZNF184Q99676 751 aaPredicted RBP10.96□□□□□ -0.65
VARS-228ENST00000495010 FBXL15Q9H469 300 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 TUBA4BQ9H853 241 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 AMBNQ9NP70 447 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 TPSG1Q9NRR2 321 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 RCC2Q9P258 522 aaKnown RBP10.96□□□□□ -0.65
VARS-228ENST00000495010 CKLFQ9UBR5 152 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 JPT1Q9UK76 154 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 GMPPBQ9Y5P6 360 aa10.96□□□□□ -0.65
VARS-228ENST00000495010 SACSQ9NZJ4 4579 aa10.95□□□□□ -0.66
VARS-228ENST00000495010 UBE2QL1A1L167 161 aa10.95□□□□□ -0.66
VARS-228ENST00000495010 NDUFA3O95167 84 aa10.95□□□□□ -0.66
VARS-228ENST00000495010 IGLV1-51P01701 117 aa10.95□□□□□ -0.66
VARS-228ENST00000495010 PPP1CCP36873 323 aaKnown RBP10.95□□□□□ -0.66
VARS-228ENST00000495010 CRIP2P52943 208 aaPredicted RBP10.95□□□□□ -0.66
VARS-228ENST00000495010 CX3CL1P78423 397 aa10.95□□□□□ -0.66
VARS-228ENST00000495010 GNMTQ14749 295 aa10.95□□□□□ -0.66
VARS-228ENST00000495010 CCDC58Q4VC31 144 aa10.95□□□□□ -0.66
VARS-228ENST00000495010 RPL22L1Q6P5R6 122 aaKnown RBP10.95□□□□□ -0.66
VARS-228ENST00000495010 UNQ5815/PRO19632Q6UWF5 114 aa10.95□□□□□ -0.66
VARS-228ENST00000495010 PPP1R27Q86WC6 154 aa10.95□□□□□ -0.66
VARS-228ENST00000495010 OR2AK2Q8NG84 335 aa10.95□□□□□ -0.66
VARS-228ENST00000495010 TMED9Q9BVK6 235 aa10.95□□□□□ -0.66
VARS-228ENST00000495010 SLA2Q9H6Q3 261 aa10.95□□□□□ -0.66
VARS-228ENST00000495010 FBXO7Q9Y3I1 522 aa10.95□□□□□ -0.66
VARS-228ENST00000495010 H0Y980 276 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 RRHO14718 337 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 MAS1P04201 325 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 ALPLP05186 524 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 GSTP1P09211 210 aaKnown RBP10.94□□□□□ -0.66
VARS-228ENST00000495010 OR3A3P47888 321 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 NDPQ00604 133 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 HAGHQ16775 308 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 C19orf54Q5BKX5 351 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 GLIPR1L1Q6UWM5 242 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 ZNF833PQ6ZTB9 187 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 GTSCR1Q86UQ5 136 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 ODF3L1Q8IXM7 274 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 JAGN1Q8N5M9 183 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 OR52I1Q8NGK6 324 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 MUL1Q969V5 352 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 RANGRFQ9HD47 186 aaPredicted RBP10.94□□□□□ -0.66
VARS-228ENST00000495010 ZNF355PQ9NSJ1 428 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 RPL36Q9Y3U8 105 aaKnown RBP10.94□□□□□ -0.66
VARS-228ENST00000495010 NUBP2Q9Y5Y2 271 aa10.94□□□□□ -0.66
VARS-228ENST00000495010 SAA2-SAA4A0A096LPE2 208 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 C13orf42A0A1B0GVH6 325 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 EI24O14681 340 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 YPEL1O60688 119 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 TRGV3P03979 118 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 GLAP06280 429 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 SAA2P0DJI9 122 aaPredicted RBP10.93□□□□□ -0.66
VARS-228ENST00000495010 FUT3P21217 361 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 ZP3P21754 424 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 RASSF2P50749 326 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 HTD2P86397 168 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 AKIRIN2Q53H80 203 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 AWAT2Q6E213 333 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 CD200R1LQ6Q8B3 271 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 FAM131AQ6UXB0 335 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 TMPRSS11AQ6ZMR5 421 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 ZNF554Q86TJ5 538 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 GAPTQ8N292 157 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 GALMQ96C23 342 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 ORAI1Q96D31 301 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 RHOVQ96L33 236 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 YPEL2Q96QA6 119 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 CLCC1Q96S66 551 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 FAM103A1Q9BTL3 118 aaKnown RBP10.93□□□□□ -0.66
VARS-228ENST00000495010 SELENOIQ9C0D9 397 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 BANF2Q9H503 90 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 CNOT2Q9NZN8 540 aaKnown RBP10.93□□□□□ -0.66
VARS-228ENST00000495010 ABRACLQ9P1F3 81 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 STEAP1Q9UHE8 339 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 LRRC42Q9Y546 428 aa10.93□□□□□ -0.66
VARS-228ENST00000495010 FAM90A7PA6NKC0 464 aa10.92□□□□□ -0.66
VARS-228ENST00000495010 FAM90A23PA8MXZ1 464 aa10.92□□□□□ -0.66
VARS-228ENST00000495010 H7C2Y5 167 aa10.92□□□□□ -0.66
VARS-228ENST00000495010 CRTAPO75718 401 aaPredicted RBP10.92□□□□□ -0.66
VARS-228ENST00000495010 CIB2O75838 187 aa10.92□□□□□ -0.66
VARS-228ENST00000495010 SC5DO75845 299 aa10.92□□□□□ -0.66
VARS-228ENST00000495010 GABRB1P18505 474 aa10.92□□□□□ -0.66
VARS-228ENST00000495010 MC5RP33032 325 aa10.92□□□□□ -0.66
VARS-228ENST00000495010 ALDH3A2P51648 485 aa10.92□□□□□ -0.66
VARS-228ENST00000495010 FAM71F2Q6NXP2 309 aa10.92□□□□□ -0.66
VARS-228ENST00000495010 LFNGQ8NES3 379 aa10.92□□□□□ -0.66
VARS-228ENST00000495010 RDH12Q96NR8 316 aa10.92□□□□□ -0.66
VARS-228ENST00000495010 MBNL3Q9NUK0 354 aaKnown RBP10.92□□□□□ -0.66
VARS-228ENST00000495010 PIPOXQ9P0Z9 390 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms