RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 C12orf54Q6X4T0 127 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 RBMS3Q6XE24 437 aaKnown RBP9□□□□□ -0.97
PDLIM1-205ENST00000493949 C22orf34Q6ZV56 151 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 FAM57BQ71RH2 274 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 GCNT2Q8N0V5 402 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 BHLHE23Q8NDY6 225 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 TMEM54Q969K7 222 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 CPNE4Q96A23 557 aaPredicted RBP9□□□□□ -0.97
PDLIM1-205ENST00000493949 SPACA9Q96E40 222 aaPredicted RBP9□□□□□ -0.97
PDLIM1-205ENST00000493949 TVP23CQ96ET8 276 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 GNRHR2Q96P88 292 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 PFDN5Q99471 154 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 P2RX4Q99571 388 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 NKX3-1Q99801 234 aaPredicted RBP9□□□□□ -0.97
PDLIM1-205ENST00000493949 NIPSNAP3BQ9BS92 247 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 TMEM204Q9BSN7 226 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 GGACTQ9BVM4 153 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 CTDSP1Q9GZU7 261 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 C11orf1Q9H5F2 150 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 CLCF1Q9UBD9 225 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 DKKL1Q9UK85 242 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 CADP27708 2225 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 SDCBPO00560 298 aaPredicted RBP8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 AGPAT2O15120 278 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 CTXN2P0C2S0 81 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 FCGR2AP12318 317 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 NQO2P16083 231 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 PI3P19957 117 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 SERPINA2P20848 420 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 RND2P52198 227 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 DEFA6Q01524 100 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 EWSR1Q01844 656 aaKnown RBP eCLIP8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 IL24Q13007 206 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 IGSF11Q5DX21 431 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 ADAM5Q6NVV9 412 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 FBXL14Q8N1E6 418 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 FAM24BQ8N5W8 94 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 OR2C3Q8N628 320 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 OR5R1Q8NH85 324 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 RNASE11Q8TAA1 199 aaKnown RBP8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 CD300LFQ8TDQ1 290 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 MAFIPQ8WZ33 124 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 ERGIC1Q969X5 290 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 MSI2Q96DH6 328 aaKnown RBP8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 TMEM56Q96MV1 263 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 PARD6GQ9BYG4 376 aaPredicted RBP8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 SLC2A9Q9NRM0 540 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 LYRM2Q9NU23 88 aaPredicted RBP8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 UFSP2Q9NUQ7 469 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 ELOVL5Q9NYP7 299 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 LAMP3Q9UQV4 416 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 TMEM56-RWDD3S4R434 201 aa8.99□□□□□ -0.97
PDLIM1-205ENST00000493949 TRDCB7Z8K6 153 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 TSTD3H0UI37 97 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 C16orf97H3BN30 126 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 LINC01387J3KSC0 135 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 PPP1R2P9O14990 202 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 PTBP3O95758 552 aaKnown RBP8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 PLAUP00749 431 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 IGHV4-39P01824 125 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 QDPRP09417 244 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 OR5AC1P0C628 307 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 TMEM225BP0DP42 221 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 HIST1H1BP16401 226 aaKnown RBP8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 IL11P20809 199 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 S100GP29377 79 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 HAAOP46952 286 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 GLIPR1P48060 266 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 FBXW4P57775 412 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 MRPS34P82930 218 aaKnown RBP8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 LOXL1Q08397 574 aaPredicted RBP8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 RAB35Q15286 201 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 OR2B11Q5JQS5 317 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 CRIP3Q6Q6R5 217 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 ZNF474Q6S9Z5 364 aaPredicted RBP8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 YRDCQ86U90 279 aaKnown RBP8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 H1FOOQ8IZA3 346 aaPredicted RBP8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 C1orf87Q8N0U7 546 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 FADS6Q8N9I5 356 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 Q8NFD4 153 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 STARD4Q96DR4 205 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 RCC1LQ96I51 464 aaKnown RBP8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 BTF3L4Q96K17 158 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 MCTS1Q9ULC4 181 aaKnown RBP8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 MMP24Q9Y5R2 645 aa8.98□□□□□ -0.97
PDLIM1-205ENST00000493949 TRBV24-1A0A075B6N3 115 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 hCG_1809904A0A1W2PP81 198 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 A0A1W2PPE3 182 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 A0A1W2PR64 198 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 A0A1W2PRV1 198 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 ZNF850A8MQ14 1090 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 H3BQ15 152 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 M0R135 149 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 TP53I11O14683 189 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 TXNL1O43396 289 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 PDCD6O75340 191 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 SCAF4O95104 1147 aaKnown RBP8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 DIRAS3O95661 229 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 SCGB1D2O95969 90 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms