RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 HOXA5P20719 270 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 COL10A1Q03692 680 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 MBNL2Q5VZF2 373 aaKnown RBP6.86□□□□□ -1.31
BRCA1-221ENST00000493795 OR2K2Q8NGT1 345 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 SRSF12Q8WXF0 261 aaKnown RBP6.86□□□□□ -1.31
BRCA1-221ENST00000493795 RBKSQ9H477 322 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 ZNF430Q9H8G1 570 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-221ENST00000493795 METTL1Q9UBP6 276 aaKnown RBP6.86□□□□□ -1.31
BRCA1-221ENST00000493795 TMEFF2Q9UIK5 374 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-221ENST00000493795 WIPI2Q9Y4P8 454 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 PPIAL4EA0A075B759 164 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 TRBV5-4A0A0C4DH59 114 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 PPIAL4DF5H284 164 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 PPIAL4FP0DN26 164 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 MC5RP33032 325 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 GPR6P46095 362 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-221ENST00000493795 SOX8P57073 446 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 SRSF5Q13243 272 aaKnown RBP6.86□□□□□ -1.31
BRCA1-221ENST00000493795 ZNF658BQ4V348 819 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-221ENST00000493795 PQLC2Q6ZP29 291 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 DNASE2BQ8WZ79 361 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 ZNF414Q96IQ9 312 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 ABHD1Q96SE0 405 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 OR2H1Q9GZK4 316 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 PPIAL4AQ9Y536 164 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 MYH8P13535 1937 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 RRHO14718 337 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 FTH1P19P0C7X4 201 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 ZNF250P15622 560 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 RAE1P78406 368 aaKnown RBP6.86□□□□□ -1.31
BRCA1-221ENST00000493795 MESTQ5EB52 335 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 DMKNQ6E0U4 476 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-221ENST00000493795 XAF1Q6GPH4 301 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 KIR3DL3Q8N743 410 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 CBLN4Q9NTU7 201 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 FOXJ2Q9P0K8 574 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 TRBV20OR9-2A0A075B6H5 130 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 HMX2A2RU54 273 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 CFDP00746 253 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-221ENST00000493795 MYF5P13349 255 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 SSTR5P35346 364 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 PRR7Q8TB68 274 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 CRYGNQ8WXF5 182 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 ANAPC13Q9BS18 74 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 TRAV8-6A0A0B4J262 113 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 hCG_38984A0A1B0GV85 526 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 HMGA1P17096 107 aaKnown RBP6.85□□□□□ -1.31
BRCA1-221ENST00000493795 NXT2Q9NPJ8 142 aaKnown RBP6.85□□□□□ -1.31
BRCA1-221ENST00000493795 TUBD1Q9UJT1 453 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 TNFRSF18Q9Y5U5 241 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 FAM208AQ9UK61 1670 aaKnown RBP6.85□□□□□ -1.31
BRCA1-221ENST00000493795 OGG1O15527 345 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 MYOGP15173 224 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 RCC1P18754 421 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-221ENST00000493795 PIGYQ3MUY2 71 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 GCSAMQ8N6F7 178 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 OR2Y1Q8NGV0 311 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 DMRT1Q9Y5R6 373 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 TRAV8-2A0A0B4J237 113 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 MUC1P15941 1255 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-221ENST00000493795 TM4SF4P48230 202 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 SNRPD3P62318 126 aaKnown RBP6.85□□□□□ -1.31
BRCA1-221ENST00000493795 RPL31P62899 125 aaKnown RBP6.85□□□□□ -1.31
BRCA1-221ENST00000493795 ATP5G2Q06055 141 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 UNQ5815/PRO19632Q6UWF5 114 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 NIT1Q86X76 327 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 AMER3Q8N944 861 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 OR11H7Q8NGC8 314 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 MS4A3Q96HJ5 214 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 DERL1Q9BUN8 251 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 ZNF71Q9NQZ8 489 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-221ENST00000493795 PLSCR2Q9NRY7 297 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 A0A1W2PPE3 182 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 PRR35P0CG20 571 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 MEF2BQ02080 365 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-221ENST00000493795 INO80CQ6PI98 192 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-221ENST00000493795 FAM159AQ6UWV7 190 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 DPH3P1Q9H4G8 78 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 TMEM106BQ9NUM4 274 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 DSPPQ9NZW4 1301 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 NDUFS8O00217 210 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 SLC17A3O00476 420 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 CLDN14O95500 239 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 OVCH2Q7RTZ1 564 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 BIVMQ86UB2 503 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 HOGA1Q86XE5 327 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 TDHQ8IZJ6 230 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 DEFB123Q8N688 67 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 MARS2Q96GW9 593 aaKnown RBP6.85□□□□□ -1.31
BRCA1-221ENST00000493795 SPCS1Q9Y6A9 102 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 MYH3P11055 1940 aa6.85□□□□□ -1.31
BRCA1-221ENST00000493795 CXorf65A6NEN9 183 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 CDK2AP2O75956 126 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 CXCL3P19876 107 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 PRSS12P56730 875 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 HBBP68871 147 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 FXYD3Q14802 87 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 CLEC2AQ6UVW9 174 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 CISD1Q9NZ45 108 aaKnown RBP6.84□□□□□ -1.31
BRCA1-221ENST00000493795 CEACAM4O75871 244 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms