RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 LRFN1Q9P244 771 aa11.95□□□□□ -0.5
ZIC4-215ENST00000493664 RBM7Q9Y580 266 aaKnown RBP11.95□□□□□ -0.5
ZIC4-215ENST00000493664 PRR14LQ5THK1 2151 aa11.95□□□□□ -0.5
ZIC4-215ENST00000493664 FAM166BA8MTA8 275 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 IGLV2-14P01704 120 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 CTXN2P0C2S0 81 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 NKX6-1P78426 367 aaPredicted RBP11.94□□□□□ -0.5
ZIC4-215ENST00000493664 APOBEC3DQ96AK3 386 aaPredicted RBP11.94□□□□□ -0.5
ZIC4-215ENST00000493664 PLK3Q9H4B4 646 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 SYNGR2O43760 224 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 WDR1O75083 606 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 IGKV1-5P01602 117 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 BCL2P10415 239 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 CA6P23280 308 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 SRSF7Q16629 238 aaKnown RBP eCLIP11.94□□□□□ -0.5
ZIC4-215ENST00000493664 TCEAL6Q6IPX3 200 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 H1FOOQ8IZA3 346 aaPredicted RBP11.94□□□□□ -0.5
ZIC4-215ENST00000493664 RCC1LQ96I51 464 aaKnown RBP11.94□□□□□ -0.5
ZIC4-215ENST00000493664 DLL3Q9NYJ7 618 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 PSENENQ9NZ42 101 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 KCNS2Q9ULS6 477 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 TNRC6BQ9UPQ9 1833 aaKnown RBP11.94□□□□□ -0.5
ZIC4-215ENST00000493664 A0A1B0GU03 582 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 PPP1R2P9O14990 202 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 FABP4P15090 132 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 OR8G1Q15617 311 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 SPANXN5Q5MJ07 72 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 TIPARPQ7Z3E1 657 aaKnown RBP11.94□□□□□ -0.5
ZIC4-215ENST00000493664 SAXO1Q8IYX7 474 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 FAM58AQ8N1B3 248 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 SIRT7Q9NRC8 400 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 OR14J1Q9UGF5 321 aa11.94□□□□□ -0.5
ZIC4-215ENST00000493664 CEBPZOSA8MTT3 80 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 SIRPB1O00241 398 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 HIST3H2BBQ8N257 126 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 ZNF525Q8N782 197 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 OR10V1Q8NGI7 309 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 OR5A2Q8NGI9 324 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 OR5P3Q8WZ94 311 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 IL22RA2Q969J5 263 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 RAB40CQ96S21 281 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 OPN3Q9H1Y3 402 aaPredicted RBP11.93□□□□□ -0.5
ZIC4-215ENST00000493664 SMOC1Q9H4F8 434 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 NCOR1O75376 2440 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 A0A1W2PR80 420 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 CXorf65A6NEN9 183 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 CD55P08174 381 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 S100GP29377 79 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 REC114Q7Z4M0 266 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 TGIF2LXQ8IUE1 241 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 TMEM45BQ96B21 275 aa11.93□□□□□ -0.5
ZIC4-215ENST00000493664 PGA5P0DJD9 388 aa11.92□□□□□ -0.5
ZIC4-215ENST00000493664 LHX2P50458 406 aa11.92□□□□□ -0.5
ZIC4-215ENST00000493664 RPS16P62249 146 aaKnown RBP11.92□□□□□ -0.5
ZIC4-215ENST00000493664 THOC3Q96J01 351 aaKnown RBP11.92□□□□□ -0.5
ZIC4-215ENST00000493664 POM121L2Q96KW2 1035 aa11.92□□□□□ -0.5
ZIC4-215ENST00000493664 SNX22Q96L94 193 aa11.92□□□□□ -0.5
ZIC4-215ENST00000493664 RBKSQ9H477 322 aa11.92□□□□□ -0.5
ZIC4-215ENST00000493664 SPENQ96T58 3664 aaKnown RBP11.92□□□□□ -0.5
ZIC4-215ENST00000493664 GPR179Q6PRD1 2367 aa11.92□□□□□ -0.5
ZIC4-215ENST00000493664 SEC14L6B5MCN3 397 aa11.92□□□□□ -0.5
ZIC4-215ENST00000493664 WNT5AP41221 380 aa11.92□□□□□ -0.5
ZIC4-215ENST00000493664 MAGEA5P43359 124 aa11.92□□□□□ -0.5
ZIC4-215ENST00000493664 ZXDAP98168 799 aa11.92□□□□□ -0.5
ZIC4-215ENST00000493664 RNPS1Q15287 305 aaKnown RBP11.92□□□□□ -0.5
ZIC4-215ENST00000493664 TESK1Q15569 626 aa11.92□□□□□ -0.5
ZIC4-215ENST00000493664 OR8G2PQ6IF36 304 aa11.92□□□□□ -0.5
ZIC4-215ENST00000493664 FAM53AQ6NSI3 398 aaPredicted RBP11.92□□□□□ -0.5
ZIC4-215ENST00000493664 DPPA3Q6W0C5 159 aa11.92□□□□□ -0.5
ZIC4-215ENST00000493664 C1orf87Q8N0U7 546 aa11.92□□□□□ -0.5
ZIC4-215ENST00000493664 CT55Q8WUE5 264 aa11.92□□□□□ -0.5
ZIC4-215ENST00000493664 CISD1Q9NZ45 108 aaKnown RBP11.92□□□□□ -0.5
ZIC4-215ENST00000493664 TRAV1-1A0A0B4J248 108 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 MARCH11A6NNE9 402 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 ANKRD30BLA7E2S9 258 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 DEGS1O15121 323 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 PDGFBP01127 241 aaPredicted RBP11.91□□□□□ -0.5
ZIC4-215ENST00000493664 SELEP16581 610 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 CLDN18P56856 261 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 CLEC12BQ2HXU8 276 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 ZNF585BQ52M93 769 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 NECAP1Q8NC96 275 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 OR4C12Q96R67 309 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 PRDM13Q9H4Q3 707 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 NCOR1P1Q9H4R4 102 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 C12orf49Q9H741 205 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 PLA2G3Q9NZ20 509 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 IGKV3D-15A0A087WSY6 115 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 UBE2L5PA0A1B0GUS4 154 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 CLDN34H7C241 214 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 HOXA4Q00056 320 aaPredicted RBP11.91□□□□□ -0.5
ZIC4-215ENST00000493664 WDR25Q64LD2 544 aaPredicted RBP11.91□□□□□ -0.5
ZIC4-215ENST00000493664 TMEM105Q8N8V8 129 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 CABLES2Q9BTV7 478 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 SDF2L1Q9HCN8 221 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 MDH2P40926 338 aaKnown RBP11.91□□□□□ -0.5
ZIC4-215ENST00000493664 GAMTQ14353 236 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 CLEC2AQ6UVW9 174 aa11.91□□□□□ -0.5
ZIC4-215ENST00000493664 NUFIP2Q7Z417 695 aaKnown RBP11.91□□□□□ -0.5
ZIC4-215ENST00000493664 C2orf88Q9BSF0 95 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms