RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 SLC22A1O15245 554 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 SOCS1O15524 211 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 CA11O75493 328 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 PF4V1P10720 104 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 CPEP16870 476 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 IL3RAP26951 378 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 BLVRBP30043 206 aaPredicted RBP8.43□□□□□ -1.06
COL6A3-214ENST00000493608 CLDN12P56749 244 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 QRFPP83859 136 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 EBI3Q14213 229 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 BEAN1Q3B7T3 259 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 TRAT1Q6PIZ9 186 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 TGIF2LXQ8IUE1 241 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 OR4X2Q8NGF9 303 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 OR2T10Q8NGZ9 312 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 KCNG3Q8TAE7 436 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 SETD6Q8TBK2 473 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 RAB9BQ9NP90 201 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 ISYNA1Q9NPH2 558 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 MBNL3Q9NUK0 354 aaKnown RBP8.43□□□□□ -1.06
COL6A3-214ENST00000493608 PLEKHJ1Q9NW61 149 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 TSSC4Q9Y5U2 329 aaPredicted RBP8.43□□□□□ -1.06
COL6A3-214ENST00000493608 U3KQE9 123 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 FGF16O43320 207 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 BPNT1O95861 308 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 CD37P11049 281 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 IGLL1P15814 213 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 ARSBP15848 533 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 CALRP27797 417 aaKnown RBP8.42□□□□□ -1.06
COL6A3-214ENST00000493608 CD1BP29016 333 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 F2RL1P55085 397 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 MLLT11Q13015 90 aaPredicted RBP8.42□□□□□ -1.06
COL6A3-214ENST00000493608 PLA2G7Q13093 441 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 RAB11BQ15907 218 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 Q6ZPA2 131 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 C18orf65Q6ZTR6 163 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 SLC35E3Q7Z769 313 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 C8orf31Q8N9H6 132 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 Q8N9W7 124 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 OR51D1Q8NGF3 324 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 OR6M1Q8NGM8 313 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 IL1F10Q8WWZ1 152 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 HDHD3Q9BSH5 251 aaPredicted RBP8.42□□□□□ -1.06
COL6A3-214ENST00000493608 TM2D1Q9BX74 207 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 LPAR5Q9H1C0 372 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 CHMP1AQ9HD42 196 aaPredicted RBP8.42□□□□□ -1.06
COL6A3-214ENST00000493608 PLSCR3Q9NRY6 295 aa8.42□□□□□ -1.06
COL6A3-214ENST00000493608 PRKDCP78527 4128 aaKnown RBP8.42□□□□□ -1.06
COL6A3-214ENST00000493608 SLC17A2O00624 439 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 ARL6IP5O75915 188 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 ATP6V1G2O95670 118 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 MOSP00540 346 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 IGHG2P01859 326 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 OR3A3P47888 321 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 HSPA13P48723 471 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 VEGFCP49767 419 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 TRAM1Q15629 374 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 SSX1Q16384 188 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 C2orf76Q3KRA6 126 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 Q3ZCU0 254 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 HES5Q5TA89 166 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 ODF3L1Q8IXM7 274 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 IZUMO1Q8IYV9 350 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 Q8N6K4 173 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 GALMQ96C23 342 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 RITA1Q96K30 269 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 ABHD14AQ9BUJ0 271 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 AK3Q9UIJ7 227 aa8.41□□□□□ -1.06
COL6A3-214ENST00000493608 PF4P02776 101 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 CNTFRP26992 372 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 GPR12P47775 334 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 ZNF137PP52743 207 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 TMEM50BP56557 158 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 HTD2P86397 168 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 HMGN3Q15651 99 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 TMEM30BQ3MIR4 351 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 STEAP3Q658P3 488 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 LCNL1Q6ZST4 164 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 STPG2Q8N412 459 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 CHPT1Q8WUD6 406 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 PHF21AQ96BD5 680 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 ARHGAP5-AS1Q96IT6 56 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 S1PR3Q99500 378 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 RASL11BQ9BPW5 248 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 HSPB9Q9BQS6 159 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 URM1Q9BTM9 101 aaKnown RBP8.4□□□□□ -1.06
COL6A3-214ENST00000493608 MRPL20Q9BYC9 149 aaKnown RBP8.4□□□□□ -1.06
COL6A3-214ENST00000493608 ABCG5Q9H222 651 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 ACOT13Q9NPJ3 140 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 ABRACLQ9P1F3 81 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 JPT1Q9UK76 154 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 RAB26Q9ULW5 256 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 V9GY05 133 aa8.4□□□□□ -1.06
COL6A3-214ENST00000493608 KRTAP4-8A0A0G2JLE6 195 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 SHISA3A0PJX4 238 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 LANCL1O43813 399 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 YPEL1O60688 119 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 RGS11O94810 467 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 NAPSAO96009 420 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 SLC2A2P11168 524 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 262.2 ms