RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 GNMTQ14749 295 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 ACSM3Q53FZ2 586 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 CXorf66Q5JRM2 361 aaPredicted RBP6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 KHDC1LQ5JSQ8 128 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 FAM71F2Q6NXP2 309 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 C5orf24Q7Z6I8 188 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 MINDY2Q8NBR6 621 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 OR52L2PQ8NGH6 319 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 OR8U1Q8NH10 309 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 C4orf3Q8WVX3 66 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 RBMXL1Q96E39 390 aaKnown RBP6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 UBE2E2Q96LR5 201 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 RASL11BQ9BPW5 248 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 NABP2Q9BQ15 211 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 SULT4A1Q9BR01 284 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 AGMATQ9BSE5 352 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 ABHD14AQ9BUJ0 271 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 CST11Q9H112 138 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 IFI27L2Q9H2X8 130 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 ZMAT5Q9UDW3 170 aaKnown RBP6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 ZNF107Q9UII5 783 aaPredicted RBP6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 SCOCQ9UIL1 159 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 ERGIC3Q9Y282 383 aa6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 LSM4Q9Y4Z0 139 aaKnown RBP6.54□□□□□ -1.36
SMARCB1-207ENST00000491967 IGHV7-81A0A0B4J1V7 117 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 FOXI3A8MTJ6 420 aaPredicted RBP6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 TMEM14DPA8MWL7 114 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 I3L521 148 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 MYL12BO14950 172 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 RAMP3O60896 148 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 NDUFA3O95167 84 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 UCHL1P09936 223 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 OR5H8P0DN80 308 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 SRMP19623 302 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 PPP1CCP36873 323 aaKnown RBP6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 ACTBP60709 375 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 DGCR2P98153 550 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 DCTN2Q13561 401 aaKnown RBP6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 TPBGQ13641 420 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 SPHARQ15513 63 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 FAM27D1Q5T7N8 215 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 GLT8D1Q68CQ7 371 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 BPIFB6Q8NFQ5 453 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 OR10V1Q8NGI7 309 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 KCNG3Q8TAE7 436 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 GALMQ96C23 342 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 KCTD7Q96MP8 289 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 GFI1Q99684 422 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 FAAP24Q9BTP7 215 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 OR51J1Q9H342 316 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 DUSP21Q9H596 190 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 KCNIP1Q9NZI2 227 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 TNCP24821 2201 aa6.53□□□□□ -1.36
SMARCB1-207ENST00000491967 SAA2-SAA4A0A096LPE2 208 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 A0A0A6YYD4 124 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 PNMA8CA0A1B0GUJ8 204 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 NUDT19A8MXV4 375 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 PROP1O75360 226 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 RGS11O94810 467 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 BPNT1O95861 308 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 SAA2P0DJI9 122 aaPredicted RBP6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 VDAC1P21796 283 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 OR3A3P47888 321 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 LUMP51884 338 aaPredicted RBP6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 C5orf64Q2M2E5 130 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 ASPHD1Q5U4P2 390 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 OR10K2Q6IF99 312 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 TMEM91Q6ZNR0 172 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 LCNL1Q6ZST4 164 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 C6orf201Q7Z4U5 140 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 PRR18Q8N4B5 295 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 SVOPQ8N4V2 548 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 ZNF491Q8N8L2 437 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 OR5AN1Q8NGI8 311 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 DPF1Q92782 380 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 FAM46BQ96A09 425 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 PTX4Q96A99 478 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 DUX3Q96PT4 197 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 RNF5Q99942 180 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 NICN1Q9BSH3 213 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 MND1Q9BWT6 205 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 MRPL20Q9BYC9 149 aaKnown RBP6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 KLK15Q9H2R5 256 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 GHITMQ9H3K2 345 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 RIMS4Q9H426 269 aaPredicted RBP6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 ISYNA1Q9NPH2 558 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 SLC23A1Q9UHI7 598 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 HSF4Q9ULV5 492 aa6.52□□□□□ -1.37
SMARCB1-207ENST00000491967 G3V318 75 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 SLC17A2O00624 439 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 RAB29O14966 203 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 LDLRAD4O15165 306 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 NBR2O15453 112 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 CT45A6P0DMU7 189 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 CT45A5P0DMU8 189 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 CT45A7P0DMV0 189 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 EGR2P11161 476 aaPredicted RBP6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 CNTFRP26992 372 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 TMEM50BP56557 158 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 MMDQ15546 238 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms