RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 S1PR3Q99500 378 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 SULT4A1Q9BR01 284 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 FAAP24Q9BTP7 215 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 ABHD14AQ9BUJ0 271 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 GON7Q9BXV9 100 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 GPR61Q9BZJ8 451 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 PLSCR3Q9NRY6 295 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 ZFP57Q9NU63 452 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 DNAH3Q8TD57 4116 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 PLXNB1O43157 2135 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 SLC22A1O15245 554 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 RGS11O94810 467 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 UCHL1P09936 223 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 HSMCR30P0CW71 290 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 MYF6P23409 242 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 SOX6P35712 828 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 MYCNOSP40205 109 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 THBS3P49746 956 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 F2RL1P55085 397 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 UNC119Q13432 240 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 IRF3Q14653 427 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 MMDQ15546 238 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 HMGN3Q15651 99 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 PNLIPRP3Q17RR3 467 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 CXorf66Q5JRM2 361 aaPredicted RBP6.5□□□□□ -1.37
LSM2-213ENST00000491421 C6orf201Q7Z4U5 140 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 C5orf24Q7Z6I8 188 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 ZNF695Q8IW36 515 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 FAM71E2Q8N5Q1 922 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 OR2AK2Q8NG84 335 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 OR6M1Q8NGM8 313 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 NRG4Q8WWG1 115 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 IL1F10Q8WWZ1 152 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 DPF1Q92782 380 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 RBMXL1Q96E39 390 aaKnown RBP6.5□□□□□ -1.37
LSM2-213ENST00000491421 RHOVQ96L33 236 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 HSPB9Q9BQS6 159 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 MCRIP2Q9BUT9 160 aaKnown RBP6.5□□□□□ -1.37
LSM2-213ENST00000491421 MRPL20Q9BYC9 149 aaKnown RBP6.5□□□□□ -1.37
LSM2-213ENST00000491421 KCNK15Q9H427 330 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 CHMP1AQ9HD42 196 aaPredicted RBP6.5□□□□□ -1.37
LSM2-213ENST00000491421 ABRACLQ9P1F3 81 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 STEAP1Q9UHE8 339 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 TPRKBQ9Y3C4 175 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 LRRC42Q9Y546 428 aa6.5□□□□□ -1.37
LSM2-213ENST00000491421 TMEM14DPA8MWL7 114 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 K7EIL1 84 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 RGS10O43665 173 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 YPEL1O60688 119 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 ARL6IP5O75915 188 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 ELANEP08246 267 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 SLC2A2P11168 524 aaPredicted RBP6.49□□□□□ -1.37
LSM2-213ENST00000491421 VDAC1P21796 283 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 PSMA1P25786 263 aaKnown RBP6.49□□□□□ -1.37
LSM2-213ENST00000491421 BLVRBP30043 206 aaPredicted RBP6.49□□□□□ -1.37
LSM2-213ENST00000491421 HOXD3P31249 432 aaPredicted RBP6.49□□□□□ -1.37
LSM2-213ENST00000491421 RAB25P57735 213 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 KRTAP10-11P60412 298 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 RPS25P62851 125 aaKnown RBP6.49□□□□□ -1.37
LSM2-213ENST00000491421 FOXE3Q13461 319 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 P2RY14Q15391 338 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 LCNL1Q6ZST4 164 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 MOB1BQ7L9L4 216 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 SVOPQ8N4V2 548 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 SETD6Q8TBK2 473 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 RAX2Q96IS3 184 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 DUX3Q96PT4 197 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 YPEL2Q96QA6 119 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 NABP2Q9BQ15 211 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 NICN1Q9BSH3 213 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 TM2D1Q9BX74 207 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 ANKRD60Q9BZ19 345 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 CCDC90BQ9GZT6 254 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 PLGRKTQ9HBL7 147 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 PLEKHJ1Q9NW61 149 aa6.49□□□□□ -1.37
LSM2-213ENST00000491421 ZNF107Q9UII5 783 aaPredicted RBP6.49□□□□□ -1.37
LSM2-213ENST00000491421 SAA2-SAA4A0A096LPE2 208 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 A0A0A6YYD4 124 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 A6NHS1 94 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 CCL24O00175 119 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 SLC17A2O00624 439 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 ST8SIA5O15466 376 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 NAPSAO96009 420 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 IGHG4P01861 327 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 IGF1P05019 195 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 SAA2P0DJI9 122 aaPredicted RBP6.48□□□□□ -1.37
LSM2-213ENST00000491421 OR5H8P0DN80 308 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 CD37P11049 281 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 ARSBP15848 533 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 OR3A3P47888 321 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 ACTBP60709 375 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 QRFPP83859 136 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 CFHR3Q02985 330 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 EGFEM1PQ0D2K5 195 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 MLLT11Q13015 90 aaPredicted RBP6.48□□□□□ -1.37
LSM2-213ENST00000491421 TPBGQ13641 420 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 TRAM1Q15629 374 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 RAB11BQ15907 218 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 LY6G6FQ5SQ64 297 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 TMEM91Q6ZNR0 172 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms