RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 FKBP14Q9NWM8 211 aa10.66□□□□□ -0.7
COL6A3-211ENST00000491233 ZMAT5Q9UDW3 170 aaKnown RBP10.66□□□□□ -0.7
COL6A3-211ENST00000491233 ERGIC3Q9Y282 383 aa10.66□□□□□ -0.7
COL6A3-211ENST00000491233 COL7A1Q02388 2944 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 SAA2-SAA4A0A096LPE2 208 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 SEC14L6B5MCN3 397 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 ATP6V0E1O15342 81 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 NBR2O15453 112 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 YPEL1O60688 119 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 RGS11O94810 467 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 UBBP0CG47 229 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 SAA2P0DJI9 122 aaPredicted RBP10.65□□□□□ -0.7
COL6A3-211ENST00000491233 OR3A3P47888 321 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 HTD2P86397 168 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 FHL3Q13643 280 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 ACSM3Q53FZ2 586 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 ZNF833PQ6ZTB9 187 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 LRRTM1Q86UE6 522 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 OR2AK2Q8NG84 335 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 MYOZ3Q8TDC0 251 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 GALMQ96C23 342 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 NEDD4LQ96PU5 975 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 YPEL2Q96QA6 119 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 PRR25Q96S07 402 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 ZNF251Q9BRH9 671 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 TMED9Q9BVK6 235 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 MND1Q9BWT6 205 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 TMEM59Q9BXS4 323 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 PARP11Q9NR21 331 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 WSB1Q9Y6I7 421 aa10.65□□□□□ -0.7
COL6A3-211ENST00000491233 G3V318 75 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 CASQ2O14958 399 aaPredicted RBP10.64□□□□□ -0.71
COL6A3-211ENST00000491233 RAMP3O60896 148 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 HLA-DRB1P01911 266 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 CDK1P06493 297 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 VSIG8P0DPA2 414 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 RPS27AP62979 156 aaKnown RBP10.64□□□□□ -0.71
COL6A3-211ENST00000491233 LY6G6FQ5SQ64 297 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 C1orf100Q5SVJ3 147 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 GLT8D1Q68CQ7 371 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 C6orf201Q7Z4U5 140 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 SVOPQ8N4V2 548 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 MS4A15Q8N5U1 240 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 PHYHIPQ92561 330 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 RITA1Q96K30 269 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 NICN1Q9BSH3 213 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 FAAP24Q9BTP7 215 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 ANKRD60Q9BZ19 345 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 IFI27L2Q9H2X8 130 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 OR51J1Q9H342 316 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.64□□□□□ -0.71
COL6A3-211ENST00000491233 ABRACLQ9P1F3 81 aa10.64□□□□□ -0.71
COL6A3-211ENST00000491233 IGHV7-81A0A0B4J1V7 117 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 ST8SIA5O15466 376 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 BLVRBP30043 206 aaPredicted RBP10.63□□□□□ -0.71
COL6A3-211ENST00000491233 PPIFP30405 207 aaKnown RBP10.63□□□□□ -0.71
COL6A3-211ENST00000491233 ECI1P42126 302 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 UNC119Q13432 240 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 C5orf64Q2M2E5 130 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 HSD17B12Q53GQ0 312 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 FAM71F2Q6NXP2 309 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 FAM131AQ6UXB0 335 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 OR11H1Q8NG94 326 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 SETD6Q8TBK2 473 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 IL1F10Q8WWZ1 152 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 CHCHD6Q9BRQ6 235 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 TM2D1Q9BX74 207 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 KLK15Q9H2R5 256 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 GNB4Q9HAV0 340 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 CHMP1AQ9HD42 196 aaPredicted RBP10.63□□□□□ -0.71
COL6A3-211ENST00000491233 STEAP1Q9UHE8 339 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 LRRC42Q9Y546 428 aa10.63□□□□□ -0.71
COL6A3-211ENST00000491233 TRAV41A0A0B4J266 112 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 NDUFA3O95167 84 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 NAPSAO96009 420 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 HTR2CP28335 458 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 NDPQ00604 133 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 MED22Q15528 200 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 ASPHD1Q5U4P2 390 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 RNLSQ5VYX0 342 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 TMEM65Q6PI78 240 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 MOB1BQ7L9L4 216 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 CEACAM19Q7Z692 300 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 KCNG3Q8TAE7 436 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 UBE2E2Q96LR5 201 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 WWC2-AS2Q96NR7 200 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 OR5B12Q96R08 314 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 PARP12Q9H0J9 701 aaKnown RBP10.62□□□□□ -0.71
COL6A3-211ENST00000491233 VCXQ9H320 206 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 KIAA1456Q9P272 454 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 SCOCQ9UIL1 159 aa10.62□□□□□ -0.71
COL6A3-211ENST00000491233 LSM2Q9Y333 95 aaKnown RBP10.62□□□□□ -0.71
COL6A3-211ENST00000491233 A0A0A6YYD4 124 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 TMEM14DPA8MWL7 114 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 PTGES3LE9PB15 166 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 SLC22A1O15245 554 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 IGLV1-40P01703 118 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 OR8U8P0C7N1 319 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 GNB1P62873 340 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 ZNF616Q08AN1 781 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms