RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 RASL11BQ9BPW5 248 aa14.15□□□□□ -0.14
HMGN1-219ENST00000491183 HSPB9Q9BQS6 159 aa14.15□□□□□ -0.14
HMGN1-219ENST00000491183 ABHD14AQ9BUJ0 271 aa14.15□□□□□ -0.14
HMGN1-219ENST00000491183 LPAR5Q9H1C0 372 aa14.15□□□□□ -0.14
HMGN1-219ENST00000491183 SOCS1O15524 211 aa14.14□□□□□ -0.15
HMGN1-219ENST00000491183 BPNT1O95861 308 aa14.14□□□□□ -0.15
HMGN1-219ENST00000491183 NAPSAO96009 420 aa14.14□□□□□ -0.15
HMGN1-219ENST00000491183 CPEP16870 476 aa14.14□□□□□ -0.15
HMGN1-219ENST00000491183 BLVRBP30043 206 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-219ENST00000491183 MAP2K4P45985 399 aa14.14□□□□□ -0.15
HMGN1-219ENST00000491183 PNLIPRP3Q17RR3 467 aa14.14□□□□□ -0.15
HMGN1-219ENST00000491183 ZNF880Q6PDB4 577 aa14.14□□□□□ -0.15
HMGN1-219ENST00000491183 SVOPQ8N4V2 548 aa14.14□□□□□ -0.15
HMGN1-219ENST00000491183 NABP2Q9BQ15 211 aa14.14□□□□□ -0.15
HMGN1-219ENST00000491183 CCDC90BQ9GZT6 254 aa14.14□□□□□ -0.15
HMGN1-219ENST00000491183 AK6Q9Y3D8 172 aaKnown RBP14.14□□□□□ -0.15
HMGN1-219ENST00000491183 LRRC42Q9Y546 428 aa14.14□□□□□ -0.15
HMGN1-219ENST00000491183 DNAH3Q8TD57 4116 aa14.13□□□□□ -0.15
HMGN1-219ENST00000491183 SLC17A2O00624 439 aa14.13□□□□□ -0.15
HMGN1-219ENST00000491183 OR3A3P47888 321 aa14.13□□□□□ -0.15
HMGN1-219ENST00000491183 KRTAP10-11P60412 298 aa14.13□□□□□ -0.15
HMGN1-219ENST00000491183 MLLT11Q13015 90 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-219ENST00000491183 P2RY14Q15391 338 aa14.13□□□□□ -0.15
HMGN1-219ENST00000491183 TEX38Q6PEX7 206 aa14.13□□□□□ -0.15
HMGN1-219ENST00000491183 LCNL1Q6ZST4 164 aa14.13□□□□□ -0.15
HMGN1-219ENST00000491183 ZNF833PQ6ZTB9 187 aa14.13□□□□□ -0.15
HMGN1-219ENST00000491183 PRSS48Q7RTY5 328 aa14.13□□□□□ -0.15
HMGN1-219ENST00000491183 FAM89BQ8N5H3 189 aa14.13□□□□□ -0.15
HMGN1-219ENST00000491183 KLHL30-AS1Q8NEE0 82 aa14.13□□□□□ -0.15
HMGN1-219ENST00000491183 OR51D1Q8NGF3 324 aa14.13□□□□□ -0.15
HMGN1-219ENST00000491183 P2RX4Q99571 388 aa14.13□□□□□ -0.15
HMGN1-219ENST00000491183 MGLLQ99685 303 aa14.13□□□□□ -0.15
HMGN1-219ENST00000491183 MRPL20Q9BYC9 149 aaKnown RBP14.13□□□□□ -0.15
HMGN1-219ENST00000491183 FOXI3A8MTJ6 420 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-219ENST00000491183 NUDT19A8MXV4 375 aa14.12□□□□□ -0.15
HMGN1-219ENST00000491183 DUS4LO95620 317 aaKnown RBP14.12□□□□□ -0.15
HMGN1-219ENST00000491183 RPLP1P05386 114 aaKnown RBP14.12□□□□□ -0.15
HMGN1-219ENST00000491183 SOX6P35712 828 aa14.12□□□□□ -0.15
HMGN1-219ENST00000491183 MYCNOSP40205 109 aa14.12□□□□□ -0.15
HMGN1-219ENST00000491183 TMEM50BP56557 158 aa14.12□□□□□ -0.15
HMGN1-219ENST00000491183 FABP5Q01469 135 aa14.12□□□□□ -0.15
HMGN1-219ENST00000491183 CFHR3Q02985 330 aa14.12□□□□□ -0.15
HMGN1-219ENST00000491183 TRAM1Q15629 374 aa14.12□□□□□ -0.15
HMGN1-219ENST00000491183 ZNF695Q8IW36 515 aa14.12□□□□□ -0.15
HMGN1-219ENST00000491183 IL1F10Q8WWZ1 152 aa14.12□□□□□ -0.15
HMGN1-219ENST00000491183 DUX3Q96PT4 197 aa14.12□□□□□ -0.15
HMGN1-219ENST00000491183 HDHD3Q9BSH5 251 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-219ENST00000491183 IFI27L2Q9H2X8 130 aa14.12□□□□□ -0.15
HMGN1-219ENST00000491183 PLEKHJ1Q9NW61 149 aa14.12□□□□□ -0.15
HMGN1-219ENST00000491183 ABRACLQ9P1F3 81 aa14.12□□□□□ -0.15
HMGN1-219ENST00000491183 SAA2-SAA4A0A096LPE2 208 aa14.11□□□□□ -0.15
HMGN1-219ENST00000491183 K7EIL1 84 aa14.11□□□□□ -0.15
HMGN1-219ENST00000491183 RGS11O94810 467 aa14.11□□□□□ -0.15
HMGN1-219ENST00000491183 SAA2P0DJI9 122 aaPredicted RBP14.11□□□□□ -0.15
HMGN1-219ENST00000491183 ARSBP15848 533 aa14.11□□□□□ -0.15
HMGN1-219ENST00000491183 CNTFRP26992 372 aa14.11□□□□□ -0.15
HMGN1-219ENST00000491183 SLC6A1P30531 599 aa14.11□□□□□ -0.15
HMGN1-219ENST00000491183 RNF152Q8N8N0 203 aa14.11□□□□□ -0.15
HMGN1-219ENST00000491183 SETD6Q8TBK2 473 aa14.11□□□□□ -0.15
HMGN1-219ENST00000491183 ZNF251Q9BRH9 671 aa14.11□□□□□ -0.15
HMGN1-219ENST00000491183 URM1Q9BTM9 101 aaKnown RBP14.11□□□□□ -0.15
HMGN1-219ENST00000491183 GON7Q9BXV9 100 aa14.11□□□□□ -0.15
HMGN1-219ENST00000491183 PLGRKTQ9HBL7 147 aa14.11□□□□□ -0.15
HMGN1-219ENST00000491183 CHMP1AQ9HD42 196 aaPredicted RBP14.11□□□□□ -0.15
HMGN1-219ENST00000491183 AK3Q9UIJ7 227 aa14.11□□□□□ -0.15
HMGN1-219ENST00000491183 TRBV6-6A0A0A6YYG2 114 aa14.1□□□□□ -0.15
HMGN1-219ENST00000491183 ST8SIA5O15466 376 aa14.1□□□□□ -0.15
HMGN1-219ENST00000491183 ARL6IP5O75915 188 aa14.1□□□□□ -0.15
HMGN1-219ENST00000491183 IGF1P05019 195 aa14.1□□□□□ -0.15
HMGN1-219ENST00000491183 SLC2A2P11168 524 aaPredicted RBP14.1□□□□□ -0.15
HMGN1-219ENST00000491183 PSMA1P25786 263 aaKnown RBP14.1□□□□□ -0.15
HMGN1-219ENST00000491183 HOXD3P31249 432 aaPredicted RBP14.1□□□□□ -0.15
HMGN1-219ENST00000491183 CLDN12P56749 244 aa14.1□□□□□ -0.15
HMGN1-219ENST00000491183 ACTBP60709 375 aa14.1□□□□□ -0.15
HMGN1-219ENST00000491183 EGFEM1PQ0D2K5 195 aa14.1□□□□□ -0.15
HMGN1-219ENST00000491183 FOXE3Q13461 319 aa14.1□□□□□ -0.15
HMGN1-219ENST00000491183 MMDQ15546 238 aa14.1□□□□□ -0.15
HMGN1-219ENST00000491183 IZUMO2Q6UXV1 221 aa14.1□□□□□ -0.15
HMGN1-219ENST00000491183 OR2AK2Q8NG84 335 aa14.1□□□□□ -0.15
HMGN1-219ENST00000491183 RAX2Q96IS3 184 aa14.1□□□□□ -0.15
HMGN1-219ENST00000491183 PARP12Q9H0J9 701 aaKnown RBP14.1□□□□□ -0.15
HMGN1-219ENST00000491183 STEAP1Q9UHE8 339 aa14.1□□□□□ -0.15
HMGN1-219ENST00000491183 ZNF107Q9UII5 783 aaPredicted RBP14.1□□□□□ -0.15
HMGN1-219ENST00000491183 RRP9O43818 475 aaKnown RBP14.09□□□□□ -0.15
HMGN1-219ENST00000491183 IGHG4P01861 327 aa14.09□□□□□ -0.15
HMGN1-219ENST00000491183 ELANEP08246 267 aa14.09□□□□□ -0.15
HMGN1-219ENST00000491183 CALRP27797 417 aaKnown RBP14.09□□□□□ -0.15
HMGN1-219ENST00000491183 VEGFCP49767 419 aa14.09□□□□□ -0.15
HMGN1-219ENST00000491183 RAB11BQ15907 218 aa14.09□□□□□ -0.15
HMGN1-219ENST00000491183 C2orf76Q3KRA6 126 aa14.09□□□□□ -0.15
HMGN1-219ENST00000491183 CXorf66Q5JRM2 361 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-219ENST00000491183 CNBD2Q96M20 576 aa14.09□□□□□ -0.15
HMGN1-219ENST00000491183 RIMS4Q9H426 269 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-219ENST00000491183 ZNF580Q9UK33 172 aa14.09□□□□□ -0.15
HMGN1-219ENST00000491183 HSF4Q9ULV5 492 aa14.09□□□□□ -0.15
HMGN1-219ENST00000491183 WI2-2373I1.2A0A1W2PRP0 233 aa14.08□□□□□ -0.16
HMGN1-219ENST00000491183 CCL24O00175 119 aa14.08□□□□□ -0.16
HMGN1-219ENST00000491183 LDLRAD4O15165 306 aa14.08□□□□□ -0.16
HMGN1-219ENST00000491183 CDX1P47902 265 aaPredicted RBP14.08□□□□□ -0.16
HMGN1-219ENST00000491183 PLA2G7Q13093 441 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms