RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 DUX1O43812 170 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 SOX15O60248 233 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 PITX3O75364 302 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 RAD51DO75771 328 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 GAGE7O76087 117 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 NDUFB4O95168 129 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 IFNA5P01569 189 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 MBP02144 154 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 TK1P04183 234 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ARG1P05089 322 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 OR5AC1P0C628 307 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 GAGE12FP0CL80 117 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 GAGE12GP0CL81 117 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 GAGE12IP0CL82 117 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 RNF224P0DH78 156 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 IGHV4-30-4P0DP06 118 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 COX5BP10606 129 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 LIPCP11150 499 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 NQO2P16083 231 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 HIST1H1BP16401 226 aaKnown RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 SERPINA2P20848 420 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 MSR1P21757 451 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 OMGP23515 440 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ATP6V0CP27449 155 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 CHATP28329 748 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 OPRM1P35372 400 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 APLNRP35414 380 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 GPX4P36969 197 aaPredicted RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 CEACAM6P40199 344 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 CD200P41217 278 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 PTGDSP41222 190 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 KIR2DS4P43632 304 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 HAAOP46952 286 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 OR3A4PP47883 348 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 PPT1P50897 306 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 NOVA1P51513 510 aaKnown RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 RND2P52198 227 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 CRIP2P52943 208 aaPredicted RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 PAX9P55771 341 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 CLDN17P56750 224 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 OR1D5P58170 312 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 S100A10P60903 97 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 PKIAP61925 76 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 HLA-DRB3P79483 266 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 DLK1P80370 383 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ADORA2A-AS1P86434 159 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 DEFA6Q01524 100 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 FOXF1Q12946 379 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 GAGE1Q13065 139 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 GAGE4Q13068 117 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 KIAA0141Q14154 515 aaPredicted RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 KIR2DS1Q14954 304 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 RNPS1Q15287 305 aaKnown RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ELOBQ15370 118 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 SHHQ15465 462 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 OR8G1Q15617 311 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM249Q2WGJ8 235 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 PLPPR5Q32ZL2 321 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 SP6Q3SY56 376 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF506Q5JVG8 444 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 AKR1C8PQ5T2L2 129 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 RIPPLY2Q5TAB7 128 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM69BQ5VUD6 431 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 OR2A2Q6IF42 318 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 BTNL3Q6UXE8 466 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 C6orf201Q7Z4U5 140 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ANKRD37Q7Z713 158 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 DPPA2Q7Z7J5 298 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 COMMD2Q86X83 199 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 CBLN2Q8IUK8 224 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 FOXRED2Q8IWF2 684 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 SFTPA2Q8IWL1 248 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 C20orf196Q8IYI0 205 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ZFP82Q8N141 532 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 TCTEX1D1Q8N7M0 179 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 LINC00469Q8N7U9 141 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 FADS6Q8N9I5 356 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ZIC4Q8N9L1 334 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 BHLHE23Q8NDY6 225 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 OR5L1Q8NGL2 311 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 OR4D5Q8NGN0 318 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 OR1F12Q8NHA8 337 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 OR14L1PQ8NHC6 308 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 CD300LFQ8TDQ1 290 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 KCNE4Q8WWG9 221 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ROBO4Q8WZ75 1007 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 PIGCQ92535 297 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 RND1Q92730 232 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 LSM10Q969L4 123 aaKnown RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 PIGTQ969N2 578 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ERGIC1Q969X5 290 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 CPNE4Q96A23 557 aaPredicted RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 MRPL24Q96A35 216 aaKnown RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 MOB3AQ96BX8 217 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 MUCL1Q96DR8 90 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 SPACA9Q96E40 222 aaPredicted RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM71F1Q96KD3 344 aaPredicted RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 IMMP1LQ96LU5 166 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 YPEL4Q96NS1 127 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms