RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 F8VVB4 439 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 F8VWA3 439 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 ADAM10O14672 748 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 RAB29O14966 203 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 RHBDL1O75783 438 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 PPP1CCP36873 323 aaKnown RBP6.24□□□□□ -1.41
NPHP3-208ENST00000490993 RPS16P62249 146 aaKnown RBP6.24□□□□□ -1.41
NPHP3-208ENST00000490993 VMA21Q3ZAQ7 101 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 BTNL3Q6UXE8 466 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 BIVMQ86UB2 503 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 EIF4E3Q8N5X7 224 aaKnown RBP6.24□□□□□ -1.41
NPHP3-208ENST00000490993 FAM169BQ8N8A8 192 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 OR52L2PQ8NGH6 319 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 OR52M1Q8NGK5 317 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 ABHD5Q8WTS1 349 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 GPR146Q96CH1 333 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 C14orf79Q96F83 325 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 RNF126Q9BV68 326 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 COL4A2P08572 1712 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 DBX1A6NMT0 343 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 TAS2R45P59539 299 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 HGFACQ04756 655 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 CACNA1EQ15878 2313 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 RXFP4Q8TDU9 374 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 RCC2Q9P258 522 aaKnown RBP6.24□□□□□ -1.41
NPHP3-208ENST00000490993 SRCAPQ6ZRS2 3230 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 ODAMA1E959 279 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 RBFOX3A6NFN3 312 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 OR2C1O95371 312 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 FABP1P07148 127 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 CELA3BP08861 270 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 TIMP3P35625 211 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 FOXG1P55316 489 aaPredicted RBP6.24□□□□□ -1.41
NPHP3-208ENST00000490993 NKX6-1P78426 367 aaPredicted RBP6.24□□□□□ -1.41
NPHP3-208ENST00000490993 SERF2P84101 59 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 NHLH2Q02577 135 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 MBNL2Q5VZF2 373 aaKnown RBP6.24□□□□□ -1.41
NPHP3-208ENST00000490993 OR1L1Q8NH94 360 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 VSTM2AQ8TAG5 236 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 ITLN1Q8WWA0 313 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 NRIP2Q9BQI9 281 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 OR1A1Q9P1Q5 309 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 RPS10-NUDT3A0A1W2PQS6 291 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 KCNAB3O43448 404 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 ATP6V0CP27449 155 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 RPS10P46783 165 aaKnown RBP6.24□□□□□ -1.41
NPHP3-208ENST00000490993 TLE1Q04724 770 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 RSPO1Q2MKA7 263 aaPredicted RBP6.24□□□□□ -1.41
NPHP3-208ENST00000490993 ZNF497Q6ZNH5 498 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 RNF144BQ7Z419 303 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 MRGPRGQ86SM5 289 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 CCL17Q92583 94 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 SMIM8Q96KF7 97 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 PRNDQ9UKY0 176 aa6.24□□□□□ -1.41
NPHP3-208ENST00000490993 ALPK2Q86TB3 2170 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 PPIAL4EA0A075B759 164 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 IGKV1D-8A0A087WSZ0 117 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 PPIAL4DF5H284 164 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 CLDN14O95500 239 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 PPIAL4FP0DN26 164 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 G6PCP35575 357 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 PRRX1P54821 245 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 ERVS71-1P61550 626 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 KRTAP27-1Q3LI81 207 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 TMEM41BQ5BJD5 291 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 IGF2-ASQ6U949 168 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 CLEC9AQ6UXN8 241 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 RBMXL3Q8N7X1 1067 aaKnown RBP6.23□□□□□ -1.41
NPHP3-208ENST00000490993 CABLES2Q9BTV7 478 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 FAM96BQ9Y3D0 163 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 PPIAL4AQ9Y536 164 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 CNTRLQ7Z7A1 2325 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 TRAV24A0A0B4J272 114 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 TMPRSS2O15393 492 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 NAPSAO96009 420 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 KIR2DL2P43627 348 aaPredicted RBP6.23□□□□□ -1.41
NPHP3-208ENST00000490993 RTP5Q14D33 572 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 TUSC1Q2TAM9 212 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 LYPD6Q86Y78 171 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 CA5BP1Q8WTZ4 195 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 MEGF10Q96KG7 1140 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 GINS3Q9BRX5 216 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 ABHD14AQ9BUJ0 271 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 RAB1BQ9H0U4 201 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 IFT22Q9H7X7 185 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 AMMECR1Q9Y4X0 333 aaPredicted RBP6.23□□□□□ -1.41
NPHP3-208ENST00000490993 IGHV3OR15-7A0A075B7D8 119 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 MAP1LC3B2A6NCE7 125 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 DAOP14920 347 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 GNG10P50151 68 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 RAB13P51153 203 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 SUPT4H1P63272 117 aaKnown RBP6.23□□□□□ -1.41
NPHP3-208ENST00000490993 FFAR4Q5NUL3 377 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 ETV3LQ6ZN32 361 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 FGFRL1Q8N441 504 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 MAP1LC3BQ9GZQ8 125 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 ZDBF2Q9HCK1 2354 aa6.23□□□□□ -1.41
NPHP3-208ENST00000490993 MBD3L4A6NDZ8 208 aaPredicted RBP6.23□□□□□ -1.41
NPHP3-208ENST00000490993 MBD3L3A6NE82 208 aaPredicted RBP6.23□□□□□ -1.41
NPHP3-208ENST00000490993 MBD3L5A6NJ08 208 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms