RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, human

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-208	ENST00000490942	UBALD1	Q8TB05	177 aa		12.82	□□□□□ -0.36
TRA2A-208	ENST00000490942	DIRAS2	Q96HU8	199 aa		12.82	□□□□□ -0.36
TRA2A-208	ENST00000490942	ABHD14A	Q9BUJ0	271 aa		12.82	□□□□□ -0.36
TRA2A-208	ENST00000490942	ST6GALNAC5	Q9BVH7	336 aa		12.82	□□□□□ -0.36
TRA2A-208	ENST00000490942	MRPS7	Q9Y2R9	242 aa	Known RBP	12.82	□□□□□ -0.36
TRA2A-208	ENST00000490942	IGHV3-43	A0A0B4J1X8	118 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942		A0A1W2PRD5	423 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942		A0A1W2PRF3	423 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942		A0A1W2PRM7	423 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	FAM172BP	A6NC97	362 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	CTDSPL	O15194	276 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	IGHV3-43D	P0DP04	118 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	IER3	P46695	156 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	SSBP1	Q04837	148 aa	Known RBP	12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	CT45A1	Q5HYN5	189 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	LDLRAD2	Q5SZI1	272 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	UTF1	Q5T230	341 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	TPTE2P1	Q5T6R2	138 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	FAM71F2	Q6NXP2	309 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	LINC00299	Q6ZSB3	139 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	LHFPL4	Q7Z7J7	247 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	OR10J5	Q8NHC4	309 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	CT45A3	Q8NHU0	189 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	ST6GALNAC6	Q969X2	333 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	SLC23A1	Q9UHI7	598 aa		12.81	□□□□□ -0.36
TRA2A-208	ENST00000490942	IGKV1D-8	A0A087WSZ0	117 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	PTBP1	P26599	531 aa	Known RBP eCLIP	12.8	□□□□□ -0.36	5e-18	■■□□□ 14.2
TRA2A-208	ENST00000490942	TNFSF8	P32971	234 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	PPP1CC	P36873	323 aa	Known RBP	12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	CEACAM6	P40199	344 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	GNG10	P50151	68 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	ZNF134	P52741	427 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	RPL15	P61313	204 aa	Known RBP	12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	ZNF816	Q0VGE8	651 aa	Predicted RBP	12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	BAMBI	Q13145	260 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	GNMT	Q14749	295 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	SSX2	Q16385	188 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	LRRC75B	Q2VPJ9	315 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	OR8H3	Q8N146	312 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	OR10V1	Q8NGI7	309 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	LEAP2	Q969E1	77 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	RPE	Q96AT9	228 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	ABHD1	Q96SE0	405 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	SOST	Q9BQB4	213 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	AGMAT	Q9BSE5	352 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	IFT46	Q9NQC8	304 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	PIPOX	Q9P0Z9	390 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	ZNF107	Q9UII5	783 aa	Predicted RBP	12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	GAB2	Q9UQC2	676 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	SOX21	Q9Y651	276 aa	Predicted RBP	12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	NF1	P21359	2839 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	ZFHX3	Q15911	3703 aa		12.8	□□□□□ -0.36
TRA2A-208	ENST00000490942	BTBD17	A6NE02	478 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	GABARAP	H6UMI1	98 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	TRIM77	I1YAP6	450 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	GAPDH	P04406	335 aa	Known RBP	12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	BRS3	P32247	399 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	RCVRN	P35243	200 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	ETV6	P41212	452 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	TAS2R46	P59540	309 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	ACTB	P60709	375 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	ACTG1	P63261	375 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	HABP2	Q14520	560 aa	Predicted RBP	12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	IGSF11	Q5DX21	431 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	LIAT1	Q6ZQX7	453 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	SNX29P2	Q8IUI4	249 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	H1FOO	Q8IZA3	346 aa	Predicted RBP	12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	ZDHHC22	Q8N966	263 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	OR5AP2	Q8NGF4	316 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	C17orf50	Q8WW18	174 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	MAFIP	Q8WZ33	124 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	IFI27L2	Q9H2X8	130 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	RDH8	Q9NYR8	311 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	OR1A1	Q9P1Q5	309 aa		12.79	□□□□□ -0.36
TRA2A-208	ENST00000490942	MDFIC2	A0A1B0GVS7	189 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	RAB29	O14966	203 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	HOXA3	O43365	443 aa	Predicted RBP	12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	LANCL1	O43813	399 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	RNASE1	P07998	156 aa	Known RBP	12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	PTHLH	P12272	177 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	TBP	P20226	339 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	ARPC4	P59998	168 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	SLC9A3R2	Q15599	337 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	C5orf24	Q7Z6I8	188 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	GVQW1	Q8N7I0	195 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	DTX3	Q8N9I9	347 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	FCAMR	Q8WWV6	532 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	SNAPC3	Q92966	411 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	TOMM40L	Q969M1	308 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	SSX3	Q99909	188 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	GINS4	Q9BRT9	223 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	C11orf54	Q9H0W9	315 aa	Predicted RBP	12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	ABCB10	Q9NRK6	738 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	NECAP2	Q9NVZ3	263 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	MTFP1	Q9UDX5	166 aa		12.78	□□□□□ -0.36
TRA2A-208	ENST00000490942	FABP12	A6NFH5	140 aa		12.77	□□□□□ -0.37
TRA2A-208	ENST00000490942	DNAJC9-AS1	A6NH13	148 aa		12.77	□□□□□ -0.37
TRA2A-208	ENST00000490942	HSD17B6	O14756	317 aa		12.77	□□□□□ -0.37
TRA2A-208	ENST00000490942	BET1	O15155	118 aa		12.77	□□□□□ -0.37

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