RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 TEX38Q6PEX7 206 aa21.8■■□□□ 1.08
HOXB3-211ENST00000490677 ZNF695Q8IW36 515 aa21.8■■□□□ 1.08
HOXB3-211ENST00000490677 RAX2Q96IS3 184 aa21.8■■□□□ 1.08
HOXB3-211ENST00000490677 RITA1Q96K30 269 aa21.8■■□□□ 1.08
HOXB3-211ENST00000490677 YPEL2Q96QA6 119 aa21.8■■□□□ 1.08
HOXB3-211ENST00000490677 TMEM59Q9BXS4 323 aa21.8■■□□□ 1.08
HOXB3-211ENST00000490677 KCNIP1Q9NZI2 227 aa21.8■■□□□ 1.08
HOXB3-211ENST00000490677 ZNF580Q9UK33 172 aa21.8■■□□□ 1.08
HOXB3-211ENST00000490677 HSD17B12Q53GQ0 312 aa21.79■■□□□ 1.08
HOXB3-211ENST00000490677 LIPKQ5VXJ0 399 aa21.79■■□□□ 1.08
HOXB3-211ENST00000490677 ZNF833PQ6ZTB9 187 aa21.79■■□□□ 1.08
HOXB3-211ENST00000490677 SVOPQ8N4V2 548 aa21.79■■□□□ 1.08
HOXB3-211ENST00000490677 KCNG3Q8TAE7 436 aa21.79■■□□□ 1.08
HOXB3-211ENST00000490677 DUX3Q96PT4 197 aa21.79■■□□□ 1.08
HOXB3-211ENST00000490677 RASL11BQ9BPW5 248 aa21.79■■□□□ 1.08
HOXB3-211ENST00000490677 NABP2Q9BQ15 211 aa21.79■■□□□ 1.08
HOXB3-211ENST00000490677 MRPL20Q9BYC9 149 aaKnown RBP21.79■■□□□ 1.08
HOXB3-211ENST00000490677 IGF1P05019 195 aa21.78■■□□□ 1.08
HOXB3-211ENST00000490677 FOXE3Q13461 319 aa21.78■■□□□ 1.08
HOXB3-211ENST00000490677 TPBGQ13641 420 aa21.78■■□□□ 1.08
HOXB3-211ENST00000490677 NEDD4LQ96PU5 975 aa21.78■■□□□ 1.08
HOXB3-211ENST00000490677 IFI27L2Q9H2X8 130 aa21.78■■□□□ 1.08
HOXB3-211ENST00000490677 SCN3BQ9NY72 215 aa21.78■■□□□ 1.08
HOXB3-211ENST00000490677 FOXI3A8MTJ6 420 aaPredicted RBP21.77■■□□□ 1.08
HOXB3-211ENST00000490677 NUDT19A8MXV4 375 aa21.77■■□□□ 1.08
HOXB3-211ENST00000490677 IGHG4P01861 327 aa21.77■■□□□ 1.08
HOXB3-211ENST00000490677 MYF6P23409 242 aa21.77■■□□□ 1.08
HOXB3-211ENST00000490677 SOX6P35712 828 aa21.77■■□□□ 1.08
HOXB3-211ENST00000490677 OR3A3P47888 321 aa21.77■■□□□ 1.08
HOXB3-211ENST00000490677 TMEM203Q969S6 136 aa21.77■■□□□ 1.08
HOXB3-211ENST00000490677 ZNF251Q9BRH9 671 aa21.77■■□□□ 1.08
HOXB3-211ENST00000490677 LPAR5Q9H1C0 372 aa21.77■■□□□ 1.08
HOXB3-211ENST00000490677 SAA2-SAA4A0A096LPE2 208 aa21.76■■□□□ 1.07
HOXB3-211ENST00000490677 BPNT1O95861 308 aa21.76■■□□□ 1.07
HOXB3-211ENST00000490677 SAA2P0DJI9 122 aaPredicted RBP21.76■■□□□ 1.07
HOXB3-211ENST00000490677 CNTFRP26992 372 aa21.76■■□□□ 1.07
HOXB3-211ENST00000490677 RPS25P62851 125 aaKnown RBP21.76■■□□□ 1.07
HOXB3-211ENST00000490677 OR6M1Q8NGM8 313 aa21.76■■□□□ 1.07
HOXB3-211ENST00000490677 GALMQ96C23 342 aa21.76■■□□□ 1.07
HOXB3-211ENST00000490677 GON7Q9BXV9 100 aa21.76■■□□□ 1.07
HOXB3-211ENST00000490677 LRRC42Q9Y546 428 aa21.76■■□□□ 1.07
HOXB3-211ENST00000490677 ELANEP08246 267 aa21.75■■□□□ 1.07
HOXB3-211ENST00000490677 SLC2A2P11168 524 aaPredicted RBP21.75■■□□□ 1.07
HOXB3-211ENST00000490677 PSMB8P28062 276 aa21.75■■□□□ 1.07
HOXB3-211ENST00000490677 CDX1P47902 265 aaPredicted RBP21.75■■□□□ 1.07
HOXB3-211ENST00000490677 DEFB136Q30KP8 78 aa21.75■■□□□ 1.07
HOXB3-211ENST00000490677 FAM89BQ8N5H3 189 aa21.75■■□□□ 1.07
HOXB3-211ENST00000490677 MYOZ3Q8TDC0 251 aa21.75■■□□□ 1.07
HOXB3-211ENST00000490677 UFD1Q92890 307 aa21.75■■□□□ 1.07
HOXB3-211ENST00000490677 ANKRD60Q9BZ19 345 aa21.75■■□□□ 1.07
HOXB3-211ENST00000490677 PARP12Q9H0J9 701 aaKnown RBP21.75■■□□□ 1.07
HOXB3-211ENST00000490677 CCL24O00175 119 aa21.74■■□□□ 1.07
HOXB3-211ENST00000490677 SOCS1O15524 211 aa21.74■■□□□ 1.07
HOXB3-211ENST00000490677 BLVRBP30043 206 aaPredicted RBP21.74■■□□□ 1.07
HOXB3-211ENST00000490677 ACTBP60709 375 aa21.74■■□□□ 1.07
HOXB3-211ENST00000490677 MMDQ15546 238 aa21.74■■□□□ 1.07
HOXB3-211ENST00000490677 ISYNA1Q9NPH2 558 aa21.74■■□□□ 1.07
HOXB3-211ENST00000490677 ZNF107Q9UII5 783 aaPredicted RBP21.74■■□□□ 1.07
HOXB3-211ENST00000490677 TRBV6-6A0A0A6YYG2 114 aa21.73■■□□□ 1.07
HOXB3-211ENST00000490677 SLC17A2O00624 439 aa21.73■■□□□ 1.07
HOXB3-211ENST00000490677 PPIFP30405 207 aaKnown RBP21.73■■□□□ 1.07
HOXB3-211ENST00000490677 KIR2DS1Q14954 304 aa21.73■■□□□ 1.07
HOXB3-211ENST00000490677 CXorf66Q5JRM2 361 aaPredicted RBP21.73■■□□□ 1.07
HOXB3-211ENST00000490677 KCTD7Q96MP8 289 aa21.73■■□□□ 1.07
HOXB3-211ENST00000490677 GPR61Q9BZJ8 451 aa21.73■■□□□ 1.07
HOXB3-211ENST00000490677 TPRKBQ9Y3C4 175 aa21.73■■□□□ 1.07
HOXB3-211ENST00000490677 RRP9O43818 475 aaKnown RBP21.72■■□□□ 1.07
HOXB3-211ENST00000490677 RGS11O94810 467 aa21.72■■□□□ 1.07
HOXB3-211ENST00000490677 CPEP16870 476 aa21.72■■□□□ 1.07
HOXB3-211ENST00000490677 CRHBPP24387 322 aa21.72■■□□□ 1.07
HOXB3-211ENST00000490677 TMEM50BP56557 158 aa21.72■■□□□ 1.07
HOXB3-211ENST00000490677 KIAA0141Q14154 515 aaPredicted RBP21.72■■□□□ 1.07
HOXB3-211ENST00000490677 P2RY14Q15391 338 aa21.72■■□□□ 1.07
HOXB3-211ENST00000490677 OR2AK2Q8NG84 335 aa21.72■■□□□ 1.07
HOXB3-211ENST00000490677 HDHD3Q9BSH5 251 aaPredicted RBP21.72■■□□□ 1.07
HOXB3-211ENST00000490677 MCRIP2Q9BUT9 160 aaKnown RBP21.72■■□□□ 1.07
HOXB3-211ENST00000490677 AK3Q9UIJ7 227 aa21.72■■□□□ 1.07
HOXB3-211ENST00000490677 ST8SIA5O15466 376 aa21.71■■□□□ 1.07
HOXB3-211ENST00000490677 RGS10O43665 173 aa21.71■■□□□ 1.07
HOXB3-211ENST00000490677 NDUFA3O95167 84 aa21.71■■□□□ 1.07
HOXB3-211ENST00000490677 HLA-DRB1P01911 266 aa21.71■■□□□ 1.07
HOXB3-211ENST00000490677 MLLT11Q13015 90 aaPredicted RBP21.71■■□□□ 1.07
HOXB3-211ENST00000490677 FAM71F2Q6NXP2 309 aa21.71■■□□□ 1.07
HOXB3-211ENST00000490677 NPBQ8NG41 125 aa21.71■■□□□ 1.07
HOXB3-211ENST00000490677 AGMATQ9BSE5 352 aa21.71■■□□□ 1.07
HOXB3-211ENST00000490677 AK6Q9Y3D8 172 aaKnown RBP21.71■■□□□ 1.07
HOXB3-211ENST00000490677 IGHV7-81A0A0B4J1V7 117 aa21.7■■□□□ 1.06
HOXB3-211ENST00000490677 VDAC1P21796 283 aa21.7■■□□□ 1.06
HOXB3-211ENST00000490677 FABP5Q01469 135 aa21.7■■□□□ 1.06
HOXB3-211ENST00000490677 FHL3Q13643 280 aa21.7■■□□□ 1.06
HOXB3-211ENST00000490677 IL1F10Q8WWZ1 152 aa21.7■■□□□ 1.06
HOXB3-211ENST00000490677 PLEKHJ1Q9NW61 149 aa21.7■■□□□ 1.06
HOXB3-211ENST00000490677 ABRACLQ9P1F3 81 aa21.7■■□□□ 1.06
HOXB3-211ENST00000490677 G3V318 75 aa21.69■■□□□ 1.06
HOXB3-211ENST00000490677 NBR2O15453 112 aa21.69■■□□□ 1.06
HOXB3-211ENST00000490677 HSMCR30P0CW71 290 aa21.69■■□□□ 1.06
HOXB3-211ENST00000490677 MAP2K4P45985 399 aa21.69■■□□□ 1.06
HOXB3-211ENST00000490677 TRAM1Q15629 374 aa21.69■■□□□ 1.06
HOXB3-211ENST00000490677 C5orf64Q2M2E5 130 aa21.69■■□□□ 1.06
HOXB3-211ENST00000490677 MOB1BQ7L9L4 216 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms