RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 GALMQ96C23 342 aa18.1■□□□□ 0.49
COL9A3-213ENST00000489045 YPEL2Q96QA6 119 aa18.1■□□□□ 0.49
COL9A3-213ENST00000489045 GFI1Q99684 422 aa18.1■□□□□ 0.49
COL9A3-213ENST00000489045 HSPB9Q9BQS6 159 aa18.1■□□□□ 0.49
COL9A3-213ENST00000489045 CCDC90BQ9GZT6 254 aa18.1■□□□□ 0.49
COL9A3-213ENST00000489045 ISYNA1Q9NPH2 558 aa18.1■□□□□ 0.49
COL9A3-213ENST00000489045 RGS11O94810 467 aa18.09■□□□□ 0.49
COL9A3-213ENST00000489045 DUS4LO95620 317 aaKnown RBP18.09■□□□□ 0.49
COL9A3-213ENST00000489045 BLVRBP30043 206 aaPredicted RBP18.09■□□□□ 0.49
COL9A3-213ENST00000489045 P2RY14Q15391 338 aa18.09■□□□□ 0.49
COL9A3-213ENST00000489045 TEX38Q6PEX7 206 aa18.09■□□□□ 0.49
COL9A3-213ENST00000489045 SVOPQ8N4V2 548 aa18.09■□□□□ 0.49
COL9A3-213ENST00000489045 MRPL20Q9BYC9 149 aaKnown RBP18.09■□□□□ 0.49
COL9A3-213ENST00000489045 LPAR5Q9H1C0 372 aa18.09■□□□□ 0.49
COL9A3-213ENST00000489045 PLGRKTQ9HBL7 147 aa18.09■□□□□ 0.49
COL9A3-213ENST00000489045 CHMP1AQ9HD42 196 aaPredicted RBP18.09■□□□□ 0.49
COL9A3-213ENST00000489045 ABRACLQ9P1F3 81 aa18.09■□□□□ 0.49
COL9A3-213ENST00000489045 LRRC42Q9Y546 428 aa18.09■□□□□ 0.49
COL9A3-213ENST00000489045 NAPSAO96009 420 aa18.08■□□□□ 0.48
COL9A3-213ENST00000489045 CRHBPP24387 322 aa18.08■□□□□ 0.48
COL9A3-213ENST00000489045 SLC6A1P30531 599 aa18.08■□□□□ 0.48
COL9A3-213ENST00000489045 MLLT11Q13015 90 aaPredicted RBP18.08■□□□□ 0.48
COL9A3-213ENST00000489045 TRAM1Q15629 374 aa18.08■□□□□ 0.48
COL9A3-213ENST00000489045 PNLIPRP3Q17RR3 467 aa18.08■□□□□ 0.48
COL9A3-213ENST00000489045 LY6G6FQ5SQ64 297 aa18.08■□□□□ 0.48
COL9A3-213ENST00000489045 PRSS48Q7RTY5 328 aa18.08■□□□□ 0.48
COL9A3-213ENST00000489045 OR2AK2Q8NG84 335 aa18.08■□□□□ 0.48
COL9A3-213ENST00000489045 SETD6Q8TBK2 473 aa18.08■□□□□ 0.48
COL9A3-213ENST00000489045 IL1F10Q8WWZ1 152 aa18.08■□□□□ 0.48
COL9A3-213ENST00000489045 GON7Q9BXV9 100 aa18.08■□□□□ 0.48
COL9A3-213ENST00000489045 AK6Q9Y3D8 172 aaKnown RBP18.08■□□□□ 0.48
COL9A3-213ENST00000489045 SAA2-SAA4A0A096LPE2 208 aa18.07■□□□□ 0.48
COL9A3-213ENST00000489045 SLC17A2O00624 439 aa18.07■□□□□ 0.48
COL9A3-213ENST00000489045 RRP9O43818 475 aaKnown RBP18.07■□□□□ 0.48
COL9A3-213ENST00000489045 ARL6IP5O75915 188 aa18.07■□□□□ 0.48
COL9A3-213ENST00000489045 RPLP1P05386 114 aaKnown RBP18.07■□□□□ 0.48
COL9A3-213ENST00000489045 SAA2P0DJI9 122 aaPredicted RBP18.07■□□□□ 0.48
COL9A3-213ENST00000489045 CPEP16870 476 aa18.07■□□□□ 0.48
COL9A3-213ENST00000489045 PSMA1P25786 263 aaKnown RBP18.07■□□□□ 0.48
COL9A3-213ENST00000489045 SOX6P35712 828 aa18.07■□□□□ 0.48
COL9A3-213ENST00000489045 MAP2K4P45985 399 aa18.07■□□□□ 0.48
COL9A3-213ENST00000489045 OR3A3P47888 321 aa18.07■□□□□ 0.48
COL9A3-213ENST00000489045 MMDQ15546 238 aa18.07■□□□□ 0.48
COL9A3-213ENST00000489045 ZNF880Q6PDB4 577 aa18.07■□□□□ 0.48
COL9A3-213ENST00000489045 LCNL1Q6ZST4 164 aa18.07■□□□□ 0.48
COL9A3-213ENST00000489045 ZNF833PQ6ZTB9 187 aa18.07■□□□□ 0.48
COL9A3-213ENST00000489045 ZNF695Q8IW36 515 aa18.07■□□□□ 0.48
COL9A3-213ENST00000489045 NABP2Q9BQ15 211 aa18.07■□□□□ 0.48
COL9A3-213ENST00000489045 VCX3BQ9H321 246 aa18.07■□□□□ 0.48
COL9A3-213ENST00000489045 PLEKHJ1Q9NW61 149 aa18.07■□□□□ 0.48
COL9A3-213ENST00000489045 SOCS1O15524 211 aa18.06■□□□□ 0.48
COL9A3-213ENST00000489045 SLC2A2P11168 524 aaPredicted RBP18.06■□□□□ 0.48
COL9A3-213ENST00000489045 ARSBP15848 533 aa18.06■□□□□ 0.48
COL9A3-213ENST00000489045 IZUMO2Q6UXV1 221 aa18.06■□□□□ 0.48
COL9A3-213ENST00000489045 MOB1BQ7L9L4 216 aa18.06■□□□□ 0.48
COL9A3-213ENST00000489045 MGLLQ99685 303 aa18.06■□□□□ 0.48
COL9A3-213ENST00000489045 URM1Q9BTM9 101 aaKnown RBP18.06■□□□□ 0.48
COL9A3-213ENST00000489045 IFI27L2Q9H2X8 130 aa18.06■□□□□ 0.48
COL9A3-213ENST00000489045 STEAP1Q9UHE8 339 aa18.06■□□□□ 0.48
COL9A3-213ENST00000489045 CALRP27797 417 aaKnown RBP18.05■□□□□ 0.48
COL9A3-213ENST00000489045 MYCNOSP40205 109 aa18.05■□□□□ 0.48
COL9A3-213ENST00000489045 KRTAP10-11P60412 298 aa18.05■□□□□ 0.48
COL9A3-213ENST00000489045 ACTBP60709 375 aa18.05■□□□□ 0.48
COL9A3-213ENST00000489045 FABP5Q01469 135 aa18.05■□□□□ 0.48
COL9A3-213ENST00000489045 CFHR3Q02985 330 aa18.05■□□□□ 0.48
COL9A3-213ENST00000489045 RAB11BQ15907 218 aa18.05■□□□□ 0.48
COL9A3-213ENST00000489045 CXorf66Q5JRM2 361 aaPredicted RBP18.05■□□□□ 0.48
COL9A3-213ENST00000489045 DUX3Q96PT4 197 aa18.05■□□□□ 0.48
COL9A3-213ENST00000489045 P2RX4Q99571 388 aa18.05■□□□□ 0.48
COL9A3-213ENST00000489045 HDHD3Q9BSH5 251 aaPredicted RBP18.05■□□□□ 0.48
COL9A3-213ENST00000489045 ZNF107Q9UII5 783 aaPredicted RBP18.05■□□□□ 0.48
COL9A3-213ENST00000489045 AK3Q9UIJ7 227 aa18.05■□□□□ 0.48
COL9A3-213ENST00000489045 ST8SIA5O15466 376 aa18.04■□□□□ 0.48
COL9A3-213ENST00000489045 VDAC1P21796 283 aa18.04■□□□□ 0.48
COL9A3-213ENST00000489045 CNTFRP26992 372 aa18.04■□□□□ 0.48
COL9A3-213ENST00000489045 HOXD3P31249 432 aaPredicted RBP18.04■□□□□ 0.48
COL9A3-213ENST00000489045 CLDN12P56749 244 aa18.04■□□□□ 0.48
COL9A3-213ENST00000489045 FOXE3Q13461 319 aa18.04■□□□□ 0.48
COL9A3-213ENST00000489045 FAM89BQ8N5H3 189 aa18.04■□□□□ 0.48
COL9A3-213ENST00000489045 RITA1Q96K30 269 aa18.04■□□□□ 0.48
COL9A3-213ENST00000489045 CNBD2Q96M20 576 aa18.04■□□□□ 0.48
COL9A3-213ENST00000489045 TRBV6-6A0A0A6YYG2 114 aa18.03■□□□□ 0.48
COL9A3-213ENST00000489045 FOXI3A8MTJ6 420 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-213ENST00000489045 K7EIL1 84 aa18.03■□□□□ 0.48
COL9A3-213ENST00000489045 IGF1P05019 195 aa18.03■□□□□ 0.48
COL9A3-213ENST00000489045 ELANEP08246 267 aa18.03■□□□□ 0.48
COL9A3-213ENST00000489045 HSPA13P48723 471 aa18.03■□□□□ 0.48
COL9A3-213ENST00000489045 RNF152Q8N8N0 203 aa18.03■□□□□ 0.48
COL9A3-213ENST00000489045 RAX2Q96IS3 184 aa18.03■□□□□ 0.48
COL9A3-213ENST00000489045 ZNF251Q9BRH9 671 aa18.03■□□□□ 0.48
COL9A3-213ENST00000489045 GPR61Q9BZJ8 451 aa18.03■□□□□ 0.48
COL9A3-213ENST00000489045 PARP12Q9H0J9 701 aaKnown RBP18.03■□□□□ 0.48
COL9A3-213ENST00000489045 RIMS4Q9H426 269 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-213ENST00000489045 IGHG4P01861 327 aa18.02■□□□□ 0.48
COL9A3-213ENST00000489045 VEGFCP49767 419 aa18.02■□□□□ 0.48
COL9A3-213ENST00000489045 HLA-DRB3P79483 266 aa18.02■□□□□ 0.48
COL9A3-213ENST00000489045 EGFEM1PQ0D2K5 195 aa18.02■□□□□ 0.48
COL9A3-213ENST00000489045 TBCEQ15813 527 aaPredicted RBP18.02■□□□□ 0.48
COL9A3-213ENST00000489045 FAM71F2Q6NXP2 309 aa18.02■□□□□ 0.48
COL9A3-213ENST00000489045 DPF1Q92782 380 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms