RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 UBE2WQ96B02 151 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 TSSK6Q9BXA6 273 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 C11orf49Q9H6J7 331 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 RPUSD1Q9UJJ7 312 aaKnown RBP1.54□□□□□ -2.16
RFC4-213ENST00000489028 ZNF391Q9UJN7 358 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 WASHC3Q9Y3C0 194 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 FIS1Q9Y3D6 152 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 PHLDA3Q9Y5J5 127 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 MYO3BQ8WXR4 1341 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 ADCY9O60503 1353 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 ABCC11Q96J66 1382 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 MAP3K5Q99683 1374 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 ARAP3Q8WWN8 1544 aa1.54□□□□□ -2.16
RFC4-213ENST00000489028 A0A1W2PP64 1363 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 C15orf65H3BRN8 121 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 SH2D1AO60880 128 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 STK16O75716 305 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 TYMSP04818 313 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 OR12D1P0DN82 309 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 NQO1P15559 274 aaKnown RBP1.53□□□□□ -2.16
RFC4-213ENST00000489028 ORM2P19652 201 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 OR1E2P47887 323 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 AP2S1P53680 142 aaPredicted RBP1.53□□□□□ -2.16
RFC4-213ENST00000489028 FOXA1P55317 472 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 NPATQ14207 1427 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 PDK2Q15119 407 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 EBPQ15125 230 aaKnown RBP1.53□□□□□ -2.16
RFC4-213ENST00000489028 COQ5Q5HYK3 327 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 HES3Q5TGS1 186 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 SPATA31B1PQ5VZV4 182 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 LPCAT4Q643R3 524 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 AMMECR1LQ6DCA0 310 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 LRRN1Q6UXK5 716 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 Q6ZRU5 148 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 TICRRQ7Z2Z1 1910 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 TMEM75Q8N9X5 138 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 OR10D3Q8NH80 312 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 SLC37A2Q8TED4 501 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 ACY3Q96HD9 319 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 ABHD14BQ96IU4 210 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 MRPS26Q9BYN8 205 aaKnown RBP1.53□□□□□ -2.16
RFC4-213ENST00000489028 ZNF286AQ9HBT8 521 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 ASF1BQ9NVP2 202 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 DNAJC12Q9UKB3 198 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 U3KQK5 164 aa1.53□□□□□ -2.16
RFC4-213ENST00000489028 LTBP4Q8N2S1 1624 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 C9orf84Q5VXU9 1444 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 SSH2Q76I76 1423 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 ZBED9Q6R2W3 1325 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 TRAV8-1A0A0A6YYK1 113 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 GGTLC3B5MD39 225 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 C4orf51C9J302 202 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 CXCR6O00574 342 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 SYNGR2O43760 224 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 IGHMP01871 453 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 ISG15P05161 165 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 IL6P05231 212 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 ATP5G1P05496 136 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 OR4A8P0C604 315 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 OR13C7P0DN81 318 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 MYL12AP19105 171 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 ATP6V0CP27449 155 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 CRABP1P29762 137 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 DDTP30046 118 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 ACTBP60709 375 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 ACTG1P63261 375 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 HPCAP84074 193 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 TSPAN31Q12999 210 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 APOFQ13790 326 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 SPIN4Q56A73 249 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 ACSBG2Q5FVE4 666 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 C10orf91Q5T1B1 145 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 N4BP2L1Q5TBK1 243 aaPredicted RBP1.52□□□□□ -2.17
RFC4-213ENST00000489028 SLC51BQ86UW2 128 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 YIPF7Q8N8F6 280 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 OR11G2Q8NGC1 345 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 TESCQ96BS2 214 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 MBOAT7Q96N66 472 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 CDCA4Q9BXL8 241 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 DERL2Q9GZP9 239 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 MED28Q9H204 178 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 MAP1LC3AQ9H492 121 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 HES4Q9HCC6 221 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 BABAM2Q9NXR7 383 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 OR5V1Q9UGF6 321 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 SLC23A2Q9UGH3 650 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 ZNF230Q9UIE0 474 aaPredicted RBP1.52□□□□□ -2.17
RFC4-213ENST00000489028 ZNF443Q9Y2A4 671 aaPredicted RBP1.52□□□□□ -2.17
RFC4-213ENST00000489028 POLR1DQ9Y2S0 133 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 HDGFL3Q9Y3E1 203 aa1.52□□□□□ -2.17
RFC4-213ENST00000489028 OTOGLQ3ZCN5 2332 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 SPATA31E1Q6ZUB1 1445 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 THADAQ6YHU6 1953 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 PLXNB3Q9ULL4 1909 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 IGKV2-24A0A0C4DH68 120 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 IGKV1-12A0A0C4DH73 117 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 C5orf49A4QMS7 147 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 LINC00862A6NCI5 91 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 M0R036 132 aa1.51□□□□□ -2.17
RFC4-213ENST00000489028 ACOX3O15254 700 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms