RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 ADAM5Q6NVV9 412 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 FAHD2BQ6P2I3 314 aaPredicted RBP2.39□□□□□ -2.03
CALD1-221ENST00000489019 BTNL8Q6UX41 500 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 CLEC18BQ6UXF7 455 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 SLC25A26Q70HW3 274 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 NUFIP2Q7Z417 695 aaKnown RBP2.39□□□□□ -2.03
CALD1-221ENST00000489019 DPPA2Q7Z7J5 298 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 SLC51BQ86UW2 128 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 VASH2Q86V25 355 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 SGPP2Q8IWX5 399 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 PDZD9Q8IXQ8 264 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 MKXQ8IYA7 352 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 FAM89BQ8N5H3 189 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 GCSAMQ8N6F7 178 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 MDS2Q8NDY4 140 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 PXT1Q8NFP0 134 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 OR5T2Q8NGG2 359 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 OR56B2PQ8NGI1 322 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 OR5L1Q8NGL2 311 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 OR1K1Q8NGR3 316 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 OR6K3Q8NGY3 331 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 OR51F2Q8NH61 342 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 FGFBP3Q8TAT2 258 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 LRRC20Q8TCA0 184 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 MITD1Q8WV92 249 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 SSMEM1Q8WWF3 244 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 EMG1Q92979 244 aaKnown RBP2.39□□□□□ -2.03
CALD1-221ENST00000489019 TOMM40LQ969M1 308 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 APOBEC3DQ96AK3 386 aaPredicted RBP2.39□□□□□ -2.03
CALD1-221ENST00000489019 FAHD2AQ96GK7 314 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 OR2A7Q96R45 310 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 MICU1Q9BPX6 476 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 ATG101Q9BSB4 218 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 HDHD3Q9BSH5 251 aaPredicted RBP2.39□□□□□ -2.03
CALD1-221ENST00000489019 FAAP24Q9BTP7 215 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 ZNF471Q9BX82 626 aaPredicted RBP2.39□□□□□ -2.03
CALD1-221ENST00000489019 RNF122Q9H9V4 155 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 ZNF286AQ9HBT8 521 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 ACKR4Q9NPB9 350 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 C1orf123Q9NWV4 160 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 GSKIPQ9P0R6 139 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 ATPIF1Q9UII2 106 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 KIF25Q9UIL4 384 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 ANXA10Q9UJ72 324 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 ST3GAL6Q9Y274 331 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 KCNIP3Q9Y2W7 256 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 TMED3Q9Y3Q3 217 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 TRANK1O15050 2925 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 EML6Q6ZMW3 1958 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 PI4KAP42356 2102 aa2.39□□□□□ -2.03
CALD1-221ENST00000489019 PHF3Q92576 2039 aaKnown RBP2.39□□□□□ -2.03
CALD1-221ENST00000489019 REV3LO60673 3130 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 KIAA1549Q9HCM3 1950 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 FREM3P0C091 2139 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 IGKV1-27A0A075B6S5 117 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 TRAV14DV4A0A0A6YYC5 116 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 TRAV17A0A0B4J275 112 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 A0A0B4J2A0 478 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 IGKV1-12A0A0C4DH73 117 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 A0A1W2PR80 420 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 LEUTXA8MZ59 168 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 PRSS46E5RG02 174 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 G3V3Q6 166 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 TMEM178BH3BS89 294 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 DVL1O14640 695 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 GEMIN2O14893 280 aaKnown RBP2.38□□□□□ -2.03
CALD1-221ENST00000489019 PHF1O43189 567 aaPredicted RBP2.38□□□□□ -2.03
CALD1-221ENST00000489019 BCL2L11O43521 198 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 PDCD6O75340 191 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 CA11O75493 328 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 SCGB2A1O75556 95 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 ADAP1O75689 374 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 MPC2O95563 127 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 CFDP00746 253 aaPredicted RBP2.38□□□□□ -2.03
CALD1-221ENST00000489019 CST4P01036 141 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 IGKV1D-12P01611 117 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 IGHV2-70P01814 119 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 CTSDP07339 412 aaPredicted RBP2.38□□□□□ -2.03
CALD1-221ENST00000489019 FCGR3AP08637 254 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 MMP7P09237 267 aaPredicted RBP2.38□□□□□ -2.03
CALD1-221ENST00000489019 ZNF728P0DKX0 622 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 OR5H8P0DN80 308 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 TPT1P13693 172 aaKnown RBP2.38□□□□□ -2.03
CALD1-221ENST00000489019 PRKACAP17612 351 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 HLA-GP17693 338 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 BCL3P20749 454 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 FUT3P21217 361 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 GLRA1P23415 457 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 DTYMKP23919 212 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 PSMB6P28072 239 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 S100GP29377 79 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 FCGR2CP31995 323 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 OPRM1P35372 400 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 PTGER4P35408 488 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 DVL1P1P54792 670 aaPredicted RBP2.38□□□□□ -2.03
CALD1-221ENST00000489019 RBM11P57052 281 aaKnown RBP2.38□□□□□ -2.03
CALD1-221ENST00000489019 HILS1P60008 231 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 RPL24P83731 157 aaKnown RBP2.38□□□□□ -2.03
CALD1-221ENST00000489019 PMP22Q01453 160 aa2.38□□□□□ -2.03
CALD1-221ENST00000489019 TGFBR3Q03167 851 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms