RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 NEIL3Q8TAT5 605 aa3.81□□□□□ -1.8
CTNNB1-215ENST00000488914 ZNF564Q8TBZ8 553 aaPredicted RBP3.81□□□□□ -1.8
CTNNB1-215ENST00000488914 BLNKQ8WV28 456 aa3.81□□□□□ -1.8
CTNNB1-215ENST00000488914 LCN9Q8WX39 176 aa3.81□□□□□ -1.8
CTNNB1-215ENST00000488914 TMEM230Q96A57 120 aa3.81□□□□□ -1.8
CTNNB1-215ENST00000488914 MGLLQ99685 303 aa3.81□□□□□ -1.8
CTNNB1-215ENST00000488914 OR2H1Q9GZK4 316 aa3.81□□□□□ -1.8
CTNNB1-215ENST00000488914 OR51E2Q9H255 320 aa3.81□□□□□ -1.8
CTNNB1-215ENST00000488914 POMKQ9H5K3 350 aa3.81□□□□□ -1.8
CTNNB1-215ENST00000488914 SCN3BQ9NY72 215 aa3.81□□□□□ -1.8
CTNNB1-215ENST00000488914 SLC23A2Q9UGH3 650 aa3.81□□□□□ -1.8
CTNNB1-215ENST00000488914 NAT8Q9UHE5 227 aa3.81□□□□□ -1.8
CTNNB1-215ENST00000488914 HIGD1AQ9Y241 93 aa3.81□□□□□ -1.8
CTNNB1-215ENST00000488914 ZNF257Q9Y2Q1 563 aa3.81□□□□□ -1.8
CTNNB1-215ENST00000488914 YTHDF2Q9Y5A9 579 aaKnown RBP3.81□□□□□ -1.8
CTNNB1-215ENST00000488914 ARHGAP23Q9P227 1491 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 PNMA8CA0A1B0GUJ8 204 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 DUXBA0A1W2PPF3 345 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 SNURFLB1AK76 121 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 F6UB75 175 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 NPIPB9F8W1W9 429 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 H7C423 109 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 ZNF207O43670 478 aaKnown RBP3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 TRAF3IP2O43734 574 aaPredicted RBP3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 ZNF354AO60765 605 aaPredicted RBP3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 ARL6IP5O75915 188 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 SERPINE1P05121 402 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 HLA-DQB2P05538 268 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 IGKV5-2P06315 115 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 ADRA2AP08913 450 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 CRHBPP24387 322 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 S100A2P29034 98 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 BRS3P32247 399 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 GNG4P50150 75 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 H2BFSP57053 126 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 ZNF92Q03936 586 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 MEF2CQ06413 473 aaPredicted RBP3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 PRDX4Q13162 271 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 PAFAH1B3Q15102 231 aaKnown RBP3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 NECTIN1Q15223 517 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 NRF1Q16656 503 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 CCSMST1Q4G0I0 132 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 WDR59Q6PJI9 974 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 UGT2A3Q6UWM9 527 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 ZNF433Q8N7K0 673 aaPredicted RBP3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 TMEM178AQ8NBL3 297 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 OR2T6Q8NHC8 308 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 CT55Q8WUE5 264 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 FAM151AQ8WW52 585 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 PHYHIPLQ96FC7 376 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 PAGE5Q96GU1 130 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 NRIP2Q9BQI9 281 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 SAMD10Q9BYL1 202 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 TMEM222Q9H0R3 208 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 OR52D1Q9H346 318 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 RNF122Q9H9V4 155 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 TMEM9BQ9NQ34 198 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 ZNF71Q9NQZ8 489 aaPredicted RBP3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 UBQLN4Q9NRR5 601 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 KCNIP1Q9NZI2 227 aa3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 PCYT1BQ9Y5K3 369 aaPredicted RBP3.8□□□□□ -1.8
CTNNB1-215ENST00000488914 DENND4BO75064 1496 aaPredicted RBP3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 COL5A2P05997 1499 aaPredicted RBP3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 NPHP4O75161 1426 aaPredicted RBP3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 A0A0G2JN53 185 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 IQCMA0A1B0GVH7 501 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 TMEM72A0PK05 275 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 LINC01619G3V211 115 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 SAP18O00422 153 aaKnown RBP3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 UBFD1O14562 309 aaKnown RBP3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 TBL1XO60907 577 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 OR2A4O95047 310 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 SEMA4FO95754 770 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 OR2H2O95918 312 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 PTHP01270 115 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 IFNA7P01567 189 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 IGKV1D-16P01601 117 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 CSN2P05814 226 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 OR4A8P0C604 315 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 CSRP1P21291 193 aaKnown RBP3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 MYL9P24844 172 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 GABRA3P34903 492 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 CXCL12P48061 93 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 CCL15Q16663 113 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 PYY3Q5JQD4 70 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 TMEM207Q6UWW9 146 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 OR1N2Q8NGR9 330 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 OR8S1Q8NH09 359 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 OR10G6Q8NH81 332 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 SSC4DQ8WTU2 575 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 FGF11Q92914 225 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 TMEM54Q969K7 222 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 GPR146Q96CH1 333 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 STARD4Q96DR4 205 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 C18orf12Q96KH6 178 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 IP6K3Q96PC2 410 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 SIGLEC12Q96PQ1 595 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 OR2A7Q96R45 310 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 OR52B2Q96RD2 323 aa3.79□□□□□ -1.8
CTNNB1-215ENST00000488914 TRIB3Q96RU7 358 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms