RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 JMJD8Q96S16 334 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 SSX3Q99909 188 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 CABLES2Q9BTV7 478 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 ST6GALNAC5Q9BVH7 336 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 CHIAQ9BZP6 476 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 DPM3Q9P2X0 92 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 MRPS7Q9Y2R9 242 aaKnown RBP8.92□□□□□ -0.98
UBE4B-210ENST00000488228 TENM1Q9UKZ4 2725 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 STAB1Q9NY15 2570 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 A0A0A6YYJ9 748 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 POM121CA8CG34 1229 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 LY6LH3BQJ8 138 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 HSD17B6O14756 317 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 RNASE1P07998 156 aaKnown RBP8.91□□□□□ -0.98
UBE4B-210ENST00000488228 CEACAM3P40198 252 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 RAB13P51153 203 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 PITPNAQ00169 270 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 Q3ZCU0 254 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 FBLN7Q53RD9 439 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 Q6ZS49 121 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 LYG1Q8N1E2 194 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 LINC00311Q8N616 119 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.91□□□□□ -0.98
UBE4B-210ENST00000488228 C8orf31Q8N9H6 132 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 OR2AK2Q8NG84 335 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 TAF15Q92804 592 aaKnown RBP eCLIP8.91□□□□□ -0.98
UBE4B-210ENST00000488228 SNAPC3Q92966 411 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 RPEQ96AT9 228 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 MALSU1Q96EH3 234 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 IFI27L2Q9H2X8 130 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 VPREB3Q9UKI3 123 aa8.91□□□□□ -0.98
UBE4B-210ENST00000488228 SAA2-SAA4A0A096LPE2 208 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 A0A1W2PPI3 338 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 BTBD17A6NE02 478 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 CLDN34H7C241 214 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 TRIM77I1YAP6 450 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 TIMM23O14925 209 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 YPEL1O60688 119 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 RGS11O94810 467 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 HLA-DQB1P01920 261 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 SAA2P0DJI9 122 aaPredicted RBP8.9□□□□□ -0.98
UBE4B-210ENST00000488228 ZBTB25P24278 435 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 CD24P25063 80 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 CEACAM6P40199 344 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 OR3A3P47888 321 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 TMEM86BQ8N661 226 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 BEST4Q8NFU0 473 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 OR56B4Q8NH76 319 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 CREB3L1Q96BA8 519 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 RBMXL1Q96E39 390 aaKnown RBP8.9□□□□□ -0.98
UBE4B-210ENST00000488228 YPEL2Q96QA6 119 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 OCSTAMPQ9BR26 566 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 NXF2Q9GZY0 626 aaKnown RBP8.9□□□□□ -0.98
UBE4B-210ENST00000488228 MEGF9Q9H1U4 602 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 DPAGT1Q9H3H5 408 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 IFT46Q9NQC8 304 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 RDH8Q9NYR8 311 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 ANXA10Q9UJ72 324 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 ADAM30Q9UKF2 790 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 POMT1Q9Y6A1 747 aa8.9□□□□□ -0.98
UBE4B-210ENST00000488228 TRBV6-7A0A0A0MS04 114 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 VGLL3A8MV65 326 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 CHST1O43916 411 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 GPR137BO60478 399 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 LPLP06858 475 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 IL3RAP26951 378 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 PRSS3P35030 304 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 ARPC4P59998 168 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 SRSF7Q16629 238 aaKnown RBP eCLIP8.89□□□□□ -0.99
UBE4B-210ENST00000488228 HOGA1Q86XE5 327 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 TMEM219Q86XT9 240 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 ODF3L1Q8IXM7 274 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 DRAM1Q8N682 238 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 OR5R1Q8NH85 324 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 OR10J5Q8NHC4 309 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 PIFOQ8TCI5 191 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 ABHD14BQ96IU4 210 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 GINS4Q9BRT9 223 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 MRPL20Q9BYC9 149 aaKnown RBP8.89□□□□□ -0.99
UBE4B-210ENST00000488228 C11orf54Q9H0W9 315 aaPredicted RBP8.89□□□□□ -0.99
UBE4B-210ENST00000488228 ABCB10Q9NRK6 738 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 ANAPC10Q9UM13 185 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 TCF19Q9Y242 345 aa8.89□□□□□ -0.99
UBE4B-210ENST00000488228 IGHV3-72A0A0B4J1Y9 119 aa8.88□□□□□ -0.99
UBE4B-210ENST00000488228 FAM181BA6NEQ2 426 aa8.88□□□□□ -0.99
UBE4B-210ENST00000488228 RNF212BA8MTL3 300 aa8.88□□□□□ -0.99
UBE4B-210ENST00000488228 CBX5P45973 191 aa8.88□□□□□ -0.99
UBE4B-210ENST00000488228 ZNF137PP52743 207 aa8.88□□□□□ -0.99
UBE4B-210ENST00000488228 ACTG1P63261 375 aa8.88□□□□□ -0.99
UBE4B-210ENST00000488228 DGCR2P98153 550 aa8.88□□□□□ -0.99
UBE4B-210ENST00000488228 ZNF816Q0VGE8 651 aaPredicted RBP8.88□□□□□ -0.99
UBE4B-210ENST00000488228 AANATQ16613 207 aa8.88□□□□□ -0.99
UBE4B-210ENST00000488228 RPL39P5Q59GN2 51 aa8.88□□□□□ -0.99
UBE4B-210ENST00000488228 LY6G6FQ5SQ64 297 aa8.88□□□□□ -0.99
UBE4B-210ENST00000488228 CCDC144NLQ6NUI1 221 aa8.88□□□□□ -0.99
UBE4B-210ENST00000488228 TGIF2LXQ8IUE1 241 aa8.88□□□□□ -0.99
UBE4B-210ENST00000488228 H1FOOQ8IZA3 346 aaPredicted RBP8.88□□□□□ -0.99
UBE4B-210ENST00000488228 GPX8Q8TED1 209 aa8.88□□□□□ -0.99
UBE4B-210ENST00000488228 RTN4IP1Q8WWV3 396 aaPredicted RBP8.88□□□□□ -0.99
UBE4B-210ENST00000488228 EDARADDQ8WWZ3 215 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms