RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 SSSCA1O60232 199 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 SLC16A7O60669 478 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF253O75346 499 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF737O75373 536 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 GPR75O95800 540 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 CGAP01215 116 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 IFNA5P01569 189 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 GPX1P07203 203 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 CT62P0C5K7 136 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 PSG1P11464 419 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 CRISP2P16562 243 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 CMPK1P30085 196 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 GABRA2P47869 451 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 SLC6A8P48029 635 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 SLC11A1P49279 550 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 HINT1P49773 126 aaPredicted RBP4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 RHOBP62745 196 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 MRPS34P82930 218 aaKnown RBP4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZP4Q12836 540 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 VAMP3Q15836 100 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 ACKR1Q16570 336 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 SP6Q3SY56 376 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 NMSQ5H8A3 153 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 SPIN3Q5JUX0 258 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 FAM78BQ5VT40 261 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 LCN15Q6UWW0 184 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 Q6ZVH6 145 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR4N5Q8IXE1 308 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 C10orf53Q8N6V4 93 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 MRPL30Q8TCC3 161 aaKnown RBP4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 FAM3CQ92520 227 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 DYRK2Q92630 601 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 SPSB1Q96BD6 273 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 REEP6Q96HR9 211 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 CYYR1Q96J86 154 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 TMEM222Q9H0R3 208 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 TXNIPQ9H3M7 391 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 BANF2Q9H503 90 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF286AQ9HBT8 521 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 TUBG2Q9NRH3 451 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 NECAP2Q9NVZ3 263 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 MCTS1Q9ULC4 181 aaKnown RBP4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 VDAC3Q9Y277 283 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 CACNA1CQ13936 2221 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 EP400Q96L91 3159 aa4.04□□□□□ -1.76
CDC42BPA-213ENST00000488131 PCNX3Q9H6A9 2034 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 A0A0U1RQK1 487 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 LOC102725191A0A1B0GVB3 256 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 A0A1W2PP11 408 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 NKX2-6A6NCS4 301 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 NPIPB7O75200 414 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 CST7O76096 145 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 ONECUT2O95948 504 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 MT-ATP6P00846 226 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 NRASP01111 189 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 KRASP01116 189 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF20P17024 532 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF10P21506 573 aaPredicted RBP4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 KITLGP21583 273 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 ANOS1P23352 680 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 OMGP23515 440 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 BLVRBP30043 206 aaPredicted RBP4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 LGALS7P47929 136 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 CDC34P49427 236 aaPredicted RBP4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 PSMB3P49720 205 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 PAX9P55771 341 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 CLRN1P58418 232 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF154Q13106 437 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 PMCHL1Q16048 86 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR10J3Q5JRS4 329 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 FFAR4Q5NUL3 377 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR4A47Q6IF82 309 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 CRIP3Q6Q6R5 217 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 RNF144BQ7Z419 303 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 CALHM1Q8IU99 346 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 DEFB125Q8N687 156 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 SIGLECL1Q8N7X8 197 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR52R1Q8NGF1 315 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR52L2PQ8NGH6 319 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR51T1Q8NGJ9 327 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 PSMF1Q92530 271 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 DNAJA3Q96EY1 480 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 KCNS1Q96KK3 526 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 SAMD10Q9BYL1 202 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 PBOV1Q9GZY1 135 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZDHHC11Q9H8X9 412 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 PATZ1Q9HBE1 687 aaKnown RBP4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF160Q9HCG1 818 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 PSG11Q9UQ72 335 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 RNF24Q9Y225 148 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 TIMM9Q9Y5J7 89 aa4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 MUC22E2RYF6 1773 aaPredicted RBP4.03□□□□□ -1.76
CDC42BPA-213ENST00000488131 TRAV36DV7A0A075B6V5 113 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 GRIFINA4D1Z8 144 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 IGLON5A6NGN9 336 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 NPIPB13A6NJU9 1138 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 NPIPB4C9JG80 1138 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 G3V4G9 280 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 PHF1O43189 567 aaPredicted RBP4.03□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms